Oncorhynchus masou masou (cherry salmon): 135555904
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Entry
135555904 CDS
T10723
Symbol
neo1a
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin 1a
KO
K06766
neogenin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04350
TGF-beta signaling pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135555904 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135555904 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135555904 (neo1a)
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
DCC/UNC5 family
135555904 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
SusE
Sp38
EphA2_TM
Herpes_UL74
Bile_Hydr_Trans
DUF4834
Motif
Other DBs
NCBI-GeneID:
135555904
NCBI-ProteinID:
XP_064844785
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All DBs
Position
2:complement(15360189..15597385)
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AA seq
1487 aa
AA seq
DB search
MAERGARLLLSLLCLTFLYPATTVSRHAEKGTAARPFSPFWFSVEPWDTLAVRGAPALLN
CSAHSGDPASEPTAPQARVEWKKDGTFLSLAPDDGRRRILPDGSLLISSVVHSKHNKPDE
GTYQCVATIDSLGTIASRTARLTVAGMPRFSSQPAAASIRLGDSQVLACDVNPDLVSLAR
WEREREPLELSSRLVQLPNGALVVSNASEADAGLYRCTVENAGPAKTSEEAQLTILPETG
EERELEFLVEPLPVTKVVGASLLLPCVVTGYPAPYVRWMVGDKLVEESEGKLELVGGGSL
LIYNLTEEDAGVYSCMADITNNTIEAKAELTVQVPPEFLKRPANIYAHESMDIMFQCEVT
GSPAPTVKWVKNGDAVIPSDYFKIINEHNLQVLGLVKSDEGFYQCLAENDAGNMQSSAQL
IILEHDVALPTPPPPSLTPDTTDHVTPGSRGVANPTGPTPSAPRDVVASLVSTRFIKLTW
RPPAEPNGEDLTYSVYFNQEGTNRERILNTSRPGEMQVTIQNLMPDSKYKFRVVAHNKNG
LGESSAVLKVATQGEVQVPGPAPNLQAVSTTPTSVTLSWDTPLTGNGDVLTYKVYYMEKG
LDLEQDIDAGALSYTLMGLKKFTEYSIRVVAFNKHGPGVSTGDIAVTTLSDVPSAPPQNL
TVEVHNSKSIMVRWQPPPPGAQNGEITGYKIRYRKGTRKSEAAETTGGTQLFQLIDGLER
GTEYTFRVSAITVNGSGPATEWSTAETFESDLDESRVPDIPSSLHVRPLVNSIVVSWTPP
ENQDMVVRGYTIGYGIGSPHAQTIKVDYKQRYYSIENLDPSSHYVITLKAFNNVGEGIPV
YESAITRPQSDPIDPDVDLYELFHAPYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNS
LPKNQKITDARYYTVRWKTNIPANTKLKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRRT
STWSMTAQGTTFETIPSSSPKDVTVVSKELKPRTIIVNWQPPSEANGKITGYIIYYSTDV
NAEVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSD
KMANDQANLPVKPGSNQPPLDHGFGSSHGKPGITGSGDNHILVIVVIISVGAFTIIVVVV
GAFLCTRRTTSHQKKKRAASKSSNSSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPN
PVMTDTPIPRTSQDINPVDPSLDNSLLQRRNSYRGHESEDSISALAGRRGMRPKMMMPFD
TQPPQPVISAHPIHSLDNHHHHYHTGSLASPTRSYLHHHQGSAHLRPHACATPISYLDMV
GSTESVRNTPSTEPLPPQAQPPCQAEHQHPEPEGSYQDSTATDDEPSASGSYCSAGQPPT
AHVRPTHPLKSFAVPANPAAIFESPALPSMPLLTQTGPQLHSVKTASIGTLGRVRXPMSV
TVPSAPDVPETSKMLEDVDSSYEPDELTEEMAHLEDLMKDLNAITTA
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcaaggttgctcctctctctcctctgtctcacctttctttacccg
gcgaccaccgtgtcaagacatgctgaaaaaggcacggcggcgaggcccttcagccccttc
tggttctcggtggagccgtgggacacactggctgtgagaggtgccccagcactgctcaac
tgctcagcgcacagcggggaccctgcctcggagcccactgcgccccaggcccgtgtggag
tggaagaaggatggaaccttcctgagcctggcgccagacgacggacggcggcgtattctg
cctgacggctcgctgctcatctctagcgtggtgcactccaagcacaacaagcccgacgag
ggcacgtaccagtgtgtggccaccatcgacagcctgggaaccatcgccagccgcaccgcc
cgcctcaccgtggcaggtatgccccggttctccagccagccggcagcagccagcatacgc
ctgggagacagccaggttctggcctgcgatgtcaacccagacctggtgtctttagcccgg
tgggagcgtgagcgtgagcccctggagctgagctctcggctggtgcagctacccaacgga
gccctggtggtgagcaacgcttcggaggccgacgctgggctctaccgctgcacggtggag
aacgctgggcccgccaagaccagtgaagaggcccagctcacaatcctgccagaaaccgga
gaggagagagaactggagttcctggtagagccacttcctgtgaccaaagtggtgggggcc
agtttgctgctgccgtgtgtggtgacgggctatccagcgccctacgtccgatggatggtg
ggagacaagcttgttgaggagagtgaggggaagttggagttggtgggaggaggcagtctg
ttgatctacaacctgactgaggaggatgcaggcgtctacagctgtatggcagacatcact
aacaacactatcgaggccaaggcagagctcactgtacaagttcctccggagttcctgaag
aggccggccaacatctacgcccacgagtccatggacatcatgtttcagtgtgaggtcaca
ggctcccccgcccccacagtcaaatgggtcaaaaacggagacgctgtcattcccagcgac
tacttcaaaatcatcaatgaacacaacctgcaggtgctgggtctggtcaagtctgacgag
ggcttctaccagtgtctggcagagaacgatgcagggaacatgcagtccagcgctcagctc
atcatcctagagcacgatgtagccctccccacccctcctcccccctcactgactcctgac
actactgaccatgtaacgccaggctccagaggtgtggctaaccccactggccccaccccc
tccgccccccgtgacgtcgtggcctcgctggtctccacccgcttcatcaagctcacctgg
cgccctcctgctgagcccaacggagaagacctcacctactctgtctacttcaatcaggag
ggtaccaacagggagcgtatcctgaacaccagtcggccaggtgagatgcaggtcaccatt
cagaacctgatgcccgactccaagtacaagttccgggtggtggcacacaacaagaacggc
ctgggagagagctctgccgtcctcaaggtggccacccagggtgaagtgcaagttcctggc
cccgcccccaacctgcaggctgtgtcgaccacacccacctccgtcaccctcagctgggac
acgcccctcactggcaacggggacgtcctcacctacaaggtctactatatggagaagggt
ctggacctggaacaggacatagacgctggagctctgtcctacaccttgatgggtctgaag
aagttcacagagtacagcattagagtggtggccttcaacaagcacggtccgggagtgtcc
acaggagacatcgccgtcaccaccctgtctgatgtccccagtgctcctcctcaaaacctc
actgtggaagttcacaactcaaagagcatcatggtccggtggcagcccccaccaccaggc
gcccagaacggcgagattactgggtataagatccgttaccggaaagggacgcggaagagc
gaggcggcagaaaccacgggaggcacccagctattccaactcatcgacggtctggagcgg
gggacagagtacacgttcagagtatcagccatcacagtgaacggctccgggcccgccaca
gagtggagcaccgcagagaccttcgagagcgacctggacgagtccagggtgccagacatc
cccagctcgctacatgtgcgcccgctggtcaacagcatcgtggtgagctggacgccgccg
gagaaccaggacatggtggtacgaggctacaccatcggctatggcatcggtagcccccac
gcccagaccatcaaggtggactacaagcagcgctactacagcattgagaacctagacccc
agctcccactatgtgataaccctgaaggccttcaacaacgtgggggaggggatccctgta
tacgagagcgccatcaccaggccacagtcagaccccatagaccctgatgttgatttgtat
gaactcttccatgcgccatacacaccagtaccagaccccacccccatgctacctcccgtg
ggcgtacaggcctcggtgctcagccacgacaccatcaaggtgacctgggccgacaactct
ctgcccaagaaccagaagatcacggacgcacgctactacacggtgcgctggaagaccaac
atccccgccaacaccaagctcaagacggccaacaccaccaacctgagccacatggtgacg
ggcctgaagcccaacacgctctatgagttctctgtcatggtgaccaagggccggaggacc
agcacctggagcatgacggcccagggaaccacctttgagaccattcccagctcgtccccg
aaagatgtgactgtggtgagcaaggagctgaaaccacgtaccatcatagtcaactggcag
cccccctcagaggccaatggaaaaatcacaggctacataatctactacagtactgatgtg
aatgcggaggtgcatgactgggtgatagagccggtggtgggcaacaggttgacccaccag
atccaggagctgactctggacaccacctactacttcaagatccaggcccgtaactccaag
ggcatgggcccaatgtccgaggccgtacacttccgcacccccaagactgaatcctctgac
aaaatggctaatgaccaagccaatttgccagttaaaccaggaagtaaccaaccacctctt
gaccatggctttgggtcttcacacggaaaaccaggaattacaggaagtggggacaaccac
atcctggtcatcgtcgtcatcatctctgtgggagcgttcaccatcatcgtggtggttgtg
ggggccttcctctgcacacgacgcaccacctcccaccagaaaaagaagcgggcggcctcc
aagtcgtccaacagctcccacaagtacaagggcaactccaaggacctgaagcctccagac
ctatggatccaccacgagcggctggagctcaagcccattgacaagtcccccgagcccaac
ccggtgatgactgacacccccatcccccgcacctctcaggacatcaaccccgtggacccc
agcctggacaacagcctgctgcagagacggaactcctaccgaggccacgaatcagaagac
agcatatctgcgctggcagggcgccgggggatgcggcctaaaatgatgatgcccttcgat
acgcagcccccccagcctgtgattagcgctcaccccatccattcccttgataaccatcac
caccattatcacacgggcagcctggcatccccgacacgcagctacctccatcaccatcag
ggcagtgcccacctgcgcccgcacgcctgcgccacccccatctcctatctagacatggtg
ggctccacagagtcggtgaggaacacccccagcacagagcccctcccaccccaggcccag
cccccctgccaagccgagcaccagcacccggaacccgagggcagctaccaagactccacg
gccaccgacgatgagcccagcgccagcggcagctactgcagcgccggccagccccccacc
gcccacgtgcgccccactcaccccctcaagagctttgccgtgcccgccaaccccgccgcc
atcttcgagtcgcctgccctgcccagcatgccactgcttactcagaccgggccccagctc
cactcagtaaagacagcctccatcggcaccctgggcagagtacgcnnccccatgtcagtc
acggtgcccagtgcgccagacgtgcccgagaccagcaagatgctggaggatgtagacagt
agctacgagcctgatgagttgacagaggagatggcccacctagaggacctgatgaaggac
ctgaacgctataaccacagcctga
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