Oncorhynchus masou masou (cherry salmon): 135556187
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Entry
135556187 CDS
T10723
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial isoform X1
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135556187
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
omm01007
]
135556187
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135556187
Enzymes [BR:
omm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
135556187
Amino acid related enzymes [BR:
omm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
135556187
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
135556187
Prokaryotic type
135556187
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
GRXCR1_C
Motif
Other DBs
NCBI-GeneID:
135556187
NCBI-ProteinID:
XP_064845253
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Position
15:36080252..36083677
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AA seq
488 aa
AA seq
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MEVLMHHLWQRVLPRLPRVMSTPCKSDLSCAAGHAPTDSISRPSTHLPPSTHLPLVSRLF
QPSNLRDVGQEKRAQVDMTCKSQRLMQQAGLIHPSNPGCYYYLPATVRSMEKLVRLIDQE
MQGIGGQKLDMPSLCSAELWRRSERWDLMGKELFRLRDRHGAEYCLGPTHEEAVTELLAS
QGTLSYRQLPLLLYQITRKFRDEPKPRFGLLRGREFYMKDMYTFDVSEEAAYHTYESVCQ
AYTRLFSRLGLCIVQVHADTGNIGGKLSHEFQLPADIGEDRLLVCGSCSFSANVETMEPG
RTDCPQCQEGTLMESKGIEVGHTFYLGTKYSHIFNATFNNTQNKPAVTEMGCFGLGVTRI
LAAAIEVMSTEEAIRWPGLLAPYQVCVLPPKRGSKVDEVAGLAEELALSLGEALPRLRGE
VVLDDRTQMTIGKRLKDASRLGYPYVVVVGQKAAEETPRFEVICQQTGETTFLSRDGLVD
LFRCVETV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaagtattgatgcatcacctttggcagagagtcttgccccgcctacccagagtcatg
agcactccctgtaaaagtgatttgagctgtgctgctggacatgcccccactgactccatc
tcccgacctagcacacaccttccccctagcacacaccttcccctagtctctcgtctcttc
cagccctccaacctgcgtgatgtgggccaggagaagcgtgctcaggtggatatgacctgc
aagagccagagactgatgcagcaggcaggtctcattcacccctccaaccctggctgctac
tactacctcccggccactgtgcgctccatggagaagctggtgaggctgatcgaccaggag
atgcaggggatcggtgggcagaagctggacatgcccagcttgtgttcggcagagctgtgg
agacgcagtgagcgctgggacctgatggggaaagagctgttccgcctgagggaccgccac
ggggcggaatactgcctgggccccacccatgaggaggctgtgacagagctactggcctct
cagggaaccctgtcctacaggcagctgcctctgctactctaccagattacccgcaagttc
cgtgatgagccgaagcctcggtttgggcttctacgcgggcgggagttctacatgaaggac
atgtacacatttgacgtgagcgaagaagctgcataccacacatatgaatctgtgtgccag
gcttacacccgccttttctctcggttaggcctgtgcattgtccaggtccacgctgataca
ggaaacattggaggtaaactctcccatgagtttcagctccccgcagacatcggagaggac
aggctactggtctgtggtagctgctccttctctgccaacgtggagaccatggaaccaggc
cggacagactgcccacagtgccaggagggaacgctaatggagtctaagggcatagaggta
ggccatacgttctacctaggcaccaagtactcccacatattcaacgccaccttcaacaac
acccagaacaagcctgctgtcactgagatgggctgcttcgggctgggtgtgacccggatc
ctcgctgctgccatcgaggtgatgtccacggaggaggcaatccgctggcctgggctgctt
gccccctatcaggtctgtgttctgccccctaaaaggggcagtaaggtggatgaggtggct
ggtttagctgaggagctggccctcagtctgggggaggctctgcctaggctaagaggtgag
gtggttctggatgaccggacacagatgaccattggtaagaggctgaaggacgccagtcgg
cttggatacccgtacgtggtggtagtggggcagaaggctgccgaggagacgcccaggttt
gaggtgatctgtcagcagactggtgagacaacgttcctcagtagggatggacttgtagac
ctcttcagatgtgtggagacagtctga
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