Oncorhynchus masou masou (cherry salmon): 135556236
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Entry
135556236 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135556236
Membrane trafficking [BR:
omm04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
135556236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_4th
Ig_TPPC8_3rd
Ig_TPPC8_C
Ig_TPPC8_2nd
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
135556236
NCBI-ProteinID:
XP_064845328
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Position
15:39335640..39406811
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AA seq
1486 aa
AA seq
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MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPNN
QVQVVKNLRISVNNVVTRPSVPSSGVPGHAHRRLLSEVVLTCQPAEGGVANVITAGDYDL
NISATTPWFEAYRESFLQSMPASDHEFLNHYLACLLVVSSSEAVPVEKFLKLSQEQHRIQ
HSGEYTNPKWFIPNTLKYYVLLHDMSQGDEQRADSVYEDMKQRYGAQGCYLLKVNSRTAA
AGADEQIPDPWSQYLHKSSLQSQDQYEDPAPIVVNNTAVENNVGGTSEVDGDDSEEKDGV
LVNSLDNTHPLQLDTPSDTPGSLDALRAVAVETKPPPLATGVAAATSHGACLTLNDHDRI
RQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFSATKKWFGGGKVPEKSIAELKN
TSGLLYPPEAPELQIRKMADLCFLVQLYDLAYSCYHTAKKDFLSDQAMLYAAGALEMAAV
SAFLQVGAPRPYPAHYMDTAIQTYRDVSKNMVLAERCALLSAEVLKSQAKYSDAATLLIK
MTSEDSDLRSALLLEQAAHCFINMRNPMVRKFAFHMILAGHRFSKAGQKRHALRCYCQAM
QVYKGKGWSLAEDHINFTIGRQSFTLRQPENAVTAFRHILTNDSQQTSTQQGAFLREYLY
VYKNVTGACEVALPQLPLPCINSSATRVYFGHERRLAEGEKQAATHVSLDQEFDRDLAAM
WQDLEEQVVAAAKRGVVPATFQSTQCCLNSQTDNLRFPLAVVEEPIIVEVVFRNPLKVPL
VLSDLSLLWRFTLKDFNRPQPQEDLVGDAVPISNEKEASIPRTSQKDDVIATEVIPEFYL
SPEETKLARLKLLPHQTGQLNILGLVYNLASTSSTGDTTINSTAASQTEGPSAAEGTSVR
GRQDLEIQGPRLNQTKEEKTSVSHGPDRRLDPTITPPMPLLEVFFLQFPTALLCGEIRKA
YVEFCNMSRVTLCGLRVASTHPDFFTFGSSSLATPLTPLSPTSFENCSAYKTLATPPGAT
PGSVAAVTLVSEGDFGTGLRGGGVSGAGTGGKGITEIPLGEGTLKPGESTQLPMWLRGPD
QEGVHEIHFLFYYESAEKGGKISHRVLRHTVFICASRSLSVRATACRSNTLPEEEEERNG
SMLVFVDVENINSSEAGVREFHIAQVSSSSKQWRLHKCINPAEDKDCKLTSRERXKLCFR
ATRCKPPQVTLKASEKYTFADLSLGNELIITSTTPCADFFFRRCQPLESLRPPVAXGDTG
ETFQESGVGHGGGDKDIAGVVRKCNEVDLDIIILWKAFVVEDNKQVILEGQLHVALQTID
KEACSLTQKEEAQEMVLLKFKPELPPPMTRPSMEQLSHLIKTNLQYPESYSHPFNQKSLC
MVPVTLTLSNCSLAQVDVIIDLRYKTTSPESLEVHGSFSWLGQTQFKMQLGAQEVMQVQL
RACFLHAGVYNLGTPRVFAKLADQGAMCETSQQTATPALIIIINST
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtcggttcaggaattcatccaggactcgtttgtcccgatggtg
gcggtcctgtgcagcgaagatgcggagaaagtgactcgtaaaaacaacctgaatttctcg
gagctgctaaggcccttttgccggttaacatccgaaggtcacatgagggaccccaacaac
caggtgcaggtggtgaagaaccttcgcatcagtgtcaacaacgtggtgacacgcccttct
gtcccttcctctggcgtccctggccatgcccaccgacggctgctcagcgaggtggtgttg
acatgccaaccggctgagggtggtgttgccaatgtcattactgctggcgactatgatctc
aatattagtgccactactccctggtttgaggcttacagagagagcttcctccagtccatg
cctgcctccgaccatgagttcctcaaccactacctcgcctgtctgttggtggtgtcgtcc
agtgaggctgtaccagtggagaagttcctcaagctgtctcaggagcagcacaggatccag
cacagcggcgagtacacgaaccccaagtggttcatccccaacacactcaagtactacgtc
ctactgcacgacatgagccagggagacgaacagagggctgactctgtgtatgaggatatg
aagcagaggtatggtgctcagggttgttacctgttgaaggtcaactctcgtacggcggca
gcgggagcagacgaacagatcccagacccatggagccagtaccttcacaagagcagcctg
caaagccaggatcagtatgaggatccagcccctatagtggtgaacaacacggctgtagag
aacaacgtaggaggaacatccgaggtggatggagatgactcggaagagaaagatggagtc
ttggtcaacagtctggacaacacccatcccctccagctggatacacccagtgacacgccc
ggtagcctcgacgctctcagggccgtcgccgtggaaaccaagccaccgcccctcgccacg
ggagtggcagcggccaccagccatggggcgtgcctcacgctgaacgaccatgaccgcatc
agacagttcatccaggagtttaccttcaggggactactgcctcacatagagaagaacatc
agacagctcaatgaccagctggtctccaggaaaggcttgagtcgctctcttttctctgcc
actaagaagtggtttggaggagggaaagttccagagaagagtatcgctgaactgaagaac
acttctggcctcctctatcccccagaagcccctgagctgcagatcaggaagatggctgac
ctttgtttcctggttcagctctatgacctggcgtacagctgctaccacacggccaagaag
gatttcctctctgaccaggccatgctctatgccgctggggcactggagatggcagcagtg
tctgcgtttcttcaagttggagctccaaggccgtatccagcacactacatggacacggca
atacagacctacagagatgtgtccaagaacatggttcttgctgaacgttgtgctctgctc
agtgctgaggtactgaagagtcaggccaagtactctgatgctgctaccctcctcatcaag
atgaccagtgaggactctgacctgcgttctgccctcctattggagcaggcagcccactgt
ttcattaacatgcggaaccccatggtcaggaagtttgccttccacatgatcctggcagga
caccgcttcagcaaggcagggcagaagcgccatgcgttgcggtgttactgccaggccatg
caggtgtataagggtaaaggctggtccctggctgaggaccatatcaacttcactatcggc
cgccagtccttcaccctgcgccaaccagagaacgctgtcacagctttcagacacatcctc
accaatgacagccagcagacctccacacagcagggagccttcctccgggaatacctctat
gtctacaagaatgttacaggggcatgtgaggtggcgctaccccagctgcccctaccctgc
atcaacagctctgccaccagggtctacttcggccatgaacgccgcctggcagagggtgag
aagcaggcagccacccacgtgtccttggaccaggagtttgaccgggacctagctgccatg
tggcaggacctcgaggaacaggtggttgccgccgcaaaacgtggggtcgttccggcaacg
tttcaatccacccagtgctgcctgaacagtcagacagacaacctccgcttcccgcttgct
gttgtggaggaacccatcatagttgaggtggtgttccggaaccctctaaaggttccactg
gttctctctgacctctcgctgctctggaggtttacactcaaagacttcaatcgaccgcaa
ccgcaggaagacttggtcggagatgctgtgcccatcagcaacgagaaggaggccagcatt
cccaggacttcacagaaagatgatgtcattgccacagaagtcatcccagagttctacctg
agccctgaggagactaaattggctcgtctgaagttgctgccccaccagacaggtcagctc
aacatcctgggtctagtctataatctggcctccacctcctctactggagacactactatc
aacagcaccgcagcctcacagaccgaaggtccctcagcggcagaggggacatcagttcgt
ggtcgacaggacctagagatccagggaccgcggttgaaccagaccaaagaggagaagacc
tcagtcagccacggtcctgaccgacgtcttgaccccaccatcacccctcccatgcccctg
ctagaggtattcttcctccagttccctactgccctgctatgtggtgagatcaggaaggct
tacgtggagttctgtaacatgagtcgcgttaccctgtgtggcctgcgggtggcgtccacg
cacccagacttctttacctttggaagctcctccttagccacacctctcacccccctcagc
cccacctcttttgaaaactgctccgcctacaagaccctggccacaccccctggcgccacg
cctgggtctgttgctgcggtgacactggtttcagagggggactttgggacagggttgagg
ggaggaggagtgtccggtgcgggtacggggggtaaagggataacggagatccctctagga
gaggggacactaaagcctggagaatctacccagctgcccatgtggctgagaggaccggac
caggaaggagtccacgagatccacttcctgttctactacgagagcgccgagaagggaggc
aagatcagtcacagggtgttgcgtcacacggtatttatttgtgcgagtcgttcgctgtct
gttcgggccacagcttgtcgtagtaacacactacctgaggaggaggaggagaggaacggc
agcatgctagtctttgttgacgtggagaacatcaactcgagcgaggctggggtgcgtgag
tttcacattgcacaggtctctagcagcagtaaacagtggagactacacaagtgtataaac
ccagcagaagacaaagactgcaaactcaccagcagagagagangaaagctatgcttcaga
gcaacacgatgcaaacccccgcaagttaccttgaaggcatcagagaaatacacatttgca
gacctgagccttgggaatgaactgatcatcacctccaccactccatgtgcagatttcttc
ttccggaggtgtcagcccttggagtctctgagacctcccgttgccnatggagacacaggg
gagacattccaggagtcaggggtggggcatgggggcggggacaaggatatagcgggcgtg
gtcaggaagtgtaacgaggtggacctcgacatcatcatcctctggaaggcatttgttgtt
gaggacaacaagcaggtgatcctagagggacagcttcatgtggccctacagaccatcgac
aaagaggcctgctctttgacacagaaagaggaggctcaggagatggtgctgctgaagttt
aaaccggagctgccgcctccaatgacacgaccctctatggaacaactctcccacctcatc
aagaccaacctgcagtacccagagagctacagccaccccttcaatcagaagagtctgtgt
atggttccagtcactttgactctgtctaactgctccctggctcaagttgatgtcatcatt
gacctacgctacaaaactacaagccctgagtctctcgaggtacatggttcgttttcatgg
ctgggccagacacaattcaaaatgcagttgggggcacaagaagtgatgcaagtgcagctg
cgagcctgcttcctgcatgcgggcgtctataatctgggaacgccgcgggtttttgccaaa
ctggcggaccagggagccatgtgtgagaccagccagcagacggccacgccagcactcatc
atcatcattaacagcacctga
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