Oncorhynchus masou masou (cherry salmon): 135556239
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Entry
135556239 CDS
T10723
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135556239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135556239
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135556239
04090 CD molecules [BR:
omm04090
]
135556239
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
135556239
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Major cadherins
135556239
CD molecules [BR:
omm04090
]
Proteins
135556239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
DUF2304
Cytomega_TRL10
DUF3139
Stevor
Motif
Other DBs
NCBI-GeneID:
135556239
NCBI-ProteinID:
XP_064845332
LinkDB
All DBs
Position
15:39930113..40014068
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AA seq
925 aa
AA seq
DB search
MFRTLVALLMRLAAVQIAVQGGGTVGSLPCRQGSLPCTRGFSQEEYSVAVDEELREGQAL
LTVRFADCGLGDRVLLEVVDVEDFRLDEDGTVYARHAFRLADRKSALVVRARDLETKEDW
KTHVYLLLRNEGKRETTEHKLIKQVNSSSAAVTQQVREIVFPWHSLVVGDDGSLRRVKRD
WVIPPINVPENSRGQFPEELVRIRSDRDKNSLLRYSVTGPGADQSPTGIFIINPISGQLS
VTKPLDREHISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGSVPEGS
KPGSFVMTVTSLDKDDPKTANGMLRYKIISQNPENPSSNMFTINNKTGGIITVAAGLDRE
KVPQYTLIIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADKFYGEVQENRVNVIV
ANLTVTDKDQPHSAAWSTVYRITAGDSTGRFSIPTDLTTNEGLVTVVKPIDYEVSRSFVL
TVLAENEVSLARGIHLPRQSTATVSVRITDVNESPEFSPNPKVIKLEEGLPGGSLLTTFT
AQDPDRYMQQNIRYAKVFDPANWLKIDPVNGRISTIAVLDRESPYVKNNLYNITFMATDN
GIPPASGTGTLQMYLLDINDNAPRVFPPEVEMCEKPEPNTINITASDPDLTPNAGPFAFE
LAKRPADARRNWTLIRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSYLQVKV
CQCDHHGDCVDMERIIAAGLGTGAIIAILICIIILLVMVLFFVMWMKRRDKERQAKQLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDALETEMVKVGIRRMDERPLHQDHIYP
LRSAAPHPGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSGGD
QDYDYLSDWGPRFRKLADLYGGGDN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaaccttagtcgcgctgctgatgcgactggcagctgtgcagattgctgtgcag
ggcggagggaccgtggggtcattgccatgcaggcagggatcgttgccgtgcacacgaggc
ttctcccaggaggagtacagtgttgccgtggacgaggagctaagagagggacaagcactc
ctcaccgtgaggttcgcagactgtggcctgggcgacagggttctgttggaggtggttgac
gtggaggacttcaggctggatgaggatggcacggtgtacgcccggcatgccttccgtctt
gccgacaggaagagcgcgttggtggtgcgagcgagggatctggagaccaaggaggattgg
aagacgcatgtttacctcctcctccggaacgaaggaaagcgagagacgacagaacacaaa
ctcatcaaacaggtgaactccagctctgcagctgtgactcagcaggtgcgagagatcgtg
tttccatggcacagcttggtcgttggggacgatggatctctgaggcgggtgaagagggac
tgggtcattccccccatcaacgttcctgagaactcacgaggacagttccccgaggagcta
gtcaggatccggtcggaccgtgataagaacagtctcctgcgttacagtgtgactggaccc
ggtgctgaccagtctccgaccgggatctttatcatcaaccccatctctggacagctctct
gtgaccaaacccctcgaccgggaacacatctccaacttccatctgcgagcccatgctgtg
gacctgaatgggaaccagatagagaaccccatagacatcgtcatcaacgtcatagacatg
aatgacaacagaccagagttcacacacaccatctacaacggatcagtaccagagggatcc
aaaccagggtcctttgtgatgacagttacgtcactggacaaggatgaccctaaaacagcc
aatgggatgctccgatacaagattatatctcagaatcctgaaaacccctcctccaacatg
ttcacaatcaacaacaagacaggaggaatcatcactgtggctgcagggctagacagagag
aaagttcctcagtacacgttaatcatccaggctactgacatggaggggaacccaacctat
ggcctgtctaacacagctacggctatcatcaggatcactgacgtcaatgataaccccccg
gagttcaccgctgacaaattctatggagaggtgcaggagaaccgtgtgaatgtgatcgta
gctaatctgacagtaacagataaggaccagccccacagcgcagcctggagtactgtgtac
aggatcacagctggagactccactggacgcttctccatccccactgacctcaccaccaat
gagggactggtcactgtggttaagcctatagactatgaggtgagtcgttccttcgtgctg
acggtactggctgagaacgaggtttccctggcccgtggtatccacctgccccgtcagtcc
accgccaccgtttctgtacgcatcacagacgtcaacgagagcccagagttctcccccaac
cccaaagtcatcaaactcgaggaggggctaccgggcggctcgctactcaccacctttaca
gcacaggaccctgacagatacatgcaacagaacatacggtacgccaaggtgttcgaccct
gctaattggctgaagatagaccctgtaaacgggcggatctccaccatcgctgtgctggac
agagagtctccatatgtgaagaataacctctacaacatcaccttcatggccactgataat
ggcatccccccagccagtggtacaggtacattacagatgtacctgttggacataaatgac
aatgctcctcgtgtcttccctccggaggtggagatgtgtgagaagcctgagcccaacacc
atcaacatcaccgccagtgaccccgatctgacccctaacgccggcccctttgccttcgaa
ctggccaagcggccggcagatgcacgcaggaactggaccctcatacgcctcaatggtgaa
tatgctcagatcaggctgcggataggttttctggagagtggtatctacgaggttcctatc
atcatcacagactcaggcaacctgcccatgtccaatacatcctacctacaggtcaaggtg
tgtcagtgtgatcaccatggagactgcgtggacatggaacgcatcatcgcagcagggctg
ggcactggagcaatcatcgcaatcctcatctgtatcatcatactgctagtgatggtgttg
ttctttgtgatgtggatgaagaggagggataaggaacgtcaggccaagcagctgctcatc
gacccagaggacgatgtcagagacaacattctgaagtacgacgaagaaggaggaggagag
gaggaccaggactatgacctgagccagctgcagcagcccgacgccttggagacggaaatg
gtgaaggtggggatccgacgtatggatgagaggcccctacaccaggaccatatatacccc
ctccgttctgctgcaccccaccccggagatataggagacttcatccacgagggtctgaag
gcagctgataatgacccgacagcgcctccctacgacagtcttctggtgtttgactatgag
ggcagtggctccaccgctggctccctcagctcccttcactcctcctcttccggcggagac
caggactacgactacctcagcgactggggcccgcgcttccgcaagctggcagacctctat
ggtggaggggacaactag
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