Oncorhynchus masou masou (cherry salmon): 135556330
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Entry
135556330 CDS
T10723
Name
(RefSeq) F-box/LRR-repeat protein 5-like
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135556330
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135556330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
Hemerythrin
LRR_6
F-box
DUF7885
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
DUF3837
Motif
Other DBs
NCBI-GeneID:
135556330
NCBI-ProteinID:
XP_064845520
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All DBs
Position
15:46477192..46494595
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AA seq
681 aa
AA seq
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MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSQTNFSNNNDFRSFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCTVYNVHSDNKLSEMLSLFEKGLKSIKSEYEQLNYARQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDLKKQVMAQHCSQQRWDCAAEVLKGLSLWSQA
GELHKAFKYADHEKTDELEKELCSTHISQLPTEILLHLFRYLGPEDLCHCGQVSSAWSDL
AKTGSLWRHLYPVRWARGDHYRGPPADLNQEPDEEWVKSLQDEGKAYQEWDEDADVDESD
ETCEDSLAISSAQREKKLLNEMIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCPNL
THLDLTQTDVTDSAFDSWSSLGACPSLEHLDLSGCEKITDHTLKKLSISQKRSDRQAKLL
KSPPPISLLDERILQLMGGSRQALIFKQRTGTRCSSPSRVWVLDPSELADIEDAAEWNRR
GGVSTPEGRGFVVTKPGGSCCCRRSRRRGLRTSYSTSYWQQQYGLGEACCGHSTCCTGEM
ALRTCGGLQCLSYTTRGSAGAEFWTKCSSGGQRCLELYNRTDQSDARRSLRFLSLSGCYR
VTDLGLRALSQRGGLPLLEHLNLSGCLLITEVGLQELVSACPALNDEHFYYCDNINGPHA
DTASGCQNLQCGFRACCRSGE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttttcccgacgaggtggatgtttttactggtccacattggcgaatgaaacag
ttggtaggactttactgcgagaagctgtcacagaccaacttctccaacaacaatgacttc
cgctcatttcttcagtcactatgtgccaccttcaaggagttcaagatgcacgaacagatt
gaaaacgagtatatcatcggcctgttgcaacagcgcagctgcactgtgtataatgtgcac
tccgataacaagctttcagagatgttgtccctgtttgagaaaggactgaaaagcattaag
agcgagtatgagcagctgaactatgcccggcaactgaaagagcgactggaggcatttaca
caggacttcttaccccacatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacctatgaggagctgaaagacctcaagaagcaggtgatggcacagcactgtagc
cagcagcgatgggactgtgcagcagaagtgctgaaggggcttagtctgtggagccaggca
ggggagctgcacaaggccttcaagtatgctgaccatgagaagactgacgaactagagaaa
gagctgtgctccacccacatctcccagctacctacagagatcctgctgcatctgttccgc
tacctgggtcctgaggacctgtgtcactgtggccaggtgtcctcagcctggtccgacctg
gccaagaccggctctctgtggaggcacctctaccctgtacgctgggccagaggggatcat
tatcgtggccctccagctgatctgaatcaggaaccggatgaggagtgggtgaagagtctg
caggatgagggcaaggcctaccaggagtgggatgaggatgcagatgtggatgagtctgat
gagacttgtgaagactcattggctataagctcagctcagagggagaagaagctactgaat
gaaatgatccagaaccttctgccagctgtgggttcctctgtcaggtccatcgttctggcc
tacagctctacggtctccagtaagatggtgcgtcagatccttagtctctgtcctaatctc
acccacctggacctcactcagactgatgtcacagactccgcctttgacagttggtcatct
ctgggggcatgtccatctcttgagcacctggacctatccggctgtgagaagatcactgac
cacaccctgaagaagctgtccatttctcagaaacgatctgaccggcaagccaagcttctg
aagagcccgcctcccattagtctgctggacgagcggatcctccaattgatggggggcagc
aggcaggccctgatcttcaagcagcgtacggggacacggtgcagcagcccctccagggtc
tgggtcctggacccttcggagctggccgacatagaggatgcagcagagtggaaccgccgc
gggggagtgtctacccctgaggggcgaggctttgtggtgacgaagccaggaggttcgtgt
tgctgcaggaggagtaggaggcggggcctcaggacaagctatagcacctcctactggcag
cagcagtatgggcttggggaggcctgctgtggccattcaacctgctgcactggtgagatg
gccctgaggacttgtggagggctgcagtgtttgtcttacaccaccaggggcagtgcaggg
gcagagttttggactaaatgctcctctgggggccagcggtgcctggagctttacaacaga
actgatcagtcagacgctcgacgctcgctgagattcctcagcctctctggatgctatcgg
gttacagacctgggtttgagggcgctgtctcagcgtggaggtcttcctctcttggagcat
ctgaacctgtctggatgtctcctcatcactgaggttgggctacaggagctggtgtcagcc
tgtcctgccctcaatgatgaacacttctactactgcgacaacatcaacggtccccatgct
gatacggccagcggctgccagaacctgcagtgtggcttcagggcctgctgccgctctgga
gagtga
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