Oncorhynchus masou masou (cherry salmon): 135556396
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Entry
135556396 CDS
T10723
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135556396
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135556396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
MCP_V20_C
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
135556396
NCBI-ProteinID:
XP_064845649
LinkDB
All DBs
Position
15:50487045..50496844
Genome browser
AA seq
1221 aa
AA seq
DB search
MSVTISVIMAKIQAHSNTKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFG
NDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNG
VVFLQSPFSAQVSPGQGKSMTSPAVSATGSSVAEVGSAQSEAVASPESIYSSSGPPEPPS
RLSLPLPSRESPSQPQSSSVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEIL
HTYQVHCVINMKEQLEVKESRGHGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKR
SLFTGSSLTGKDHLKRAEDEDMSKQSKKRPRPMLLPHMTPLLKKKMKFSCSKDQSFASVG
KHGVLREFTFFDKLRRFFKSREVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYT
QFKSFLGDKELSHSVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTA
ICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLES
VQKKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIEGLKRSPATAVPVV
LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIES
VYDERQEQSTEEGGVVQQGRDGSSAPAVSDPHMLFTYEDKQILEDAASLIIYHVKRQPTI
HKDDKDHIKRIIQHFVPDLFFSRRGELSETEEWTDEEVEERGDRGGGCGGIPGAVATSGS
QQHQHQQQNGESRRRRCASPQTVELGVASSHSLAPVGGEKVDLRDPEAEHQKELDGVYNL
FFVNNNWYFFLRLHQTLCQRLLRVYRQAERQLLEHRAEQNRERLLMAECRDLAMELRLKQ
PSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNIIRQLQ
HLVSDEVCLQVAELYLAERKRGAAGANLSSQCVRTAWETSYQWKSERVMAEENCFKVMFI
QNQGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTESTLCSQNEGYFFKPVFLPRN
LRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGAL
VKARKSQHRVAVNQHERFDKWHQGWLVEHVTPAAERSVHDWLIGEEEEDMIPCKTTCLNT
QVKGLPVNRYQVHYSRKPPSP
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttactatctccgtgatcatggcgaaaattcaggcacacagcaacacgaaacaa
ataaaccaaattcaagacaaggcctatgttgtacaaaagcaagtgcaacaacagcacttt
caaaaactgaaggttgaagatgccctatcatacctggaccaagtcaaaatacgatttggg
aatgaccccggaatatacaacaaatttcttgacataatgaaagaattcaaatcacaaagc
attgacacgccgggtgttataaaccgtgtgtctcagctcttccatgggcacccggacctc
gtcttaggattcaatgccttcctgcccccagggtatcggatagagattcccaagaatggc
gtggttttccttcagtccccattctctgcccaggtgtccccaggtcaggggaagagtatg
acaagccctgctgtgagtgccacaggttcatctgttgctgaagttggatctgcccaaagt
gaagctgtggcatcgcctgaaagcatctactcatcctcagggcccccagagcctcccagt
agactgtccttgccactccccagcagagagagcccatcccagccacagtcctcctcagtg
tccccccctgcctcagagcccagcccagtagaatttgatagtgctatcagctatgtcaac
aaaatcaaaaaccgcttcctagaccatccagagatctacagatccttccttgagatacta
cacacttaccaggtacactgtgtcatcaatatgaaagagcagcttgaggtcaaggagagc
cggggtcatggtagtagtggaatgacagaggatgaagttttctcaaaagtggccagcctc
ttcaaaggccaagaggacttactggctgagtttggacagttcttaccagatgctaagaga
tcactgttcactggcagctccctgactgggaaagaccatctgaagagggcagaggatgag
gacatgagcaaacagagcaagaagagacccaggcccatgctgctgcctcacatgacacca
ctgctcaagaaaaagatgaagttttcatgctccaaagaccagtcctttgcctcagttggg
aagcatggagtcttgcgggagttcactttttttgacaagcttcgccgtttcttcaagagt
cgggaggtatacgagaacttcctccgctgtattgctttgtttaaccaggaagtggtttcg
ggagcagagctgctgcagcttgtcactccctttctggggaagtttccagagctatatacc
cagttcaagtcttttctgggggacaaagagctctctcattcagtgtctggcctgtcagac
cgatacatggaaggaggtgggggcagggaggtcgactatgcctcttgcaagcgcctggga
tccagctacagagcactacccaagacttaccagcagcccaagtgcagcggtcgcactgct
atctgcaaagaggtgctgaatgacacctgggtttctttcccctcgtggtcggaggactct
acgtttgtgagctcaaagaaaactccatatgaggagcagcttcatcgctgtgaggacgaa
aggtttgagttggatgtggtcctggagactaacctggccaccatccgggtcctggagagc
gttcagaagaagctgtcccgtctgtcgcctgaggaccaggaccgcttccgtctggacgat
tgtctgggaggcacatccgaggtcatccagcgccgagccatctaccgtatctacggcgac
aaggcccctgagattatagaggggctaaagaggagccctgctactgccgtgcctgtggtg
ctcaagagattgaaagcgaaggaggaggagtggagagaagcccaacagggcttcaacaag
atctggagggagcagtatgagaaggcctacctcaagtccctggaccaccagggggtcaac
ttcaagcagaatgacatgaaggcccttcgatccaaaagcttgctcaatgagattgaaagt
gtttatgatgagcgtcaggagcagagcacagaggaggggggcgtggtccagcagggacgt
gacgggagcagtgcgccagcggtcagcgatccccacatgttgttcacctacgaggacaag
cagatcctggaggacgccgcctctctcatcatctaccacgtcaaacgccagcccaccatc
cacaaggacgacaaggaccacatcaagcgcatcatccagcactttgtccccgacctcttc
ttctcccgccgcggcgagctcagcgagacggaggagtggacggacgaggaggtggaggag
agaggagaccggggaggaggatgtggcggtataccaggagccgtagcaacatcaggcagt
cagcaacatcagcatcagcagcagaacggggagtcgaggcggcggcgctgcgcctctccc
cagacagtggagctgggtgtagcctcgtcccatagcctggctccagtgggaggggagaag
gtggacctgagagaccctgaggcagagcaccagaaggagctggacggagtctacaacctg
ttcttcgtcaacaacaactggtacttcttcctacggcttcaccagacactgtgccagcgg
ctgctgagggtgtaccggcaggcggagaggcaactgctggagcaccgggcagagcagaac
cgtgagaggcttctgatggccgagtgccgggacctggccatggagctccgcctcaaacag
cccagtgaggtagaactggaggagtactacccagcgttcctggatatggtgcgcagtctt
ctggatgggaacctggagtccacacagtatgaggacacattgcgggagatgttcaccatc
cacgcctacattggcttcaccatcgacaagctcatccagaacatcattagacagctgcag
cacctggtgagtgatgaggtgtgtcttcaggtggctgagctgtacctggccgagaggaag
aggggtgcggcgggggctaacctgtcgtcccagtgtgtgagaacagcctgggagaccagc
taccagtggaagtcggagagggtcatggctgaggagaactgctttaaggtaatgttcatt
cagaaccaaggccaggtgaccttgaccattgagctgctggacacagaggaggcccaggct
gatgacccattggatgtacagtgcctgtccagctatatggaacagtttgtagggacagag
tcaacgctttgctcgcagaacgaaggctactttttcaaaccggtatttttgcccaggaac
ctgaggcacttcagacgctggcaggtgcgccaggtggaggcgatgcgctgcagacgggag
tggcacagacagctgggagtggagagtgctggcagtctggactgccgctttaaactcaac
acccacaagatggtgttcgtcatgaactctgaggactacatgtaccgccggggagcgctg
gtcaaagccaggaagtcccagcacagggttgctgtgaaccagcatgagcgctttgacaag
tggcaccagggctggctggtggagcacgtgaccccggcggccgagcgctcggtccacgac
tggctcataggtgaggaggaggaggacatgattccgtgcaagaccacctgcctcaacaca
caggtcaaaggcctgcctgtcaacagataccaggtgcattacagtaggaaacctccctct
ccgtag
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integrated database retrieval system
