Oncorhynchus masou masou (cherry salmon): 135556463
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Entry
135556463 CDS
T10723
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135556463
Transcription factors [BR:
omm03000
]
Eukaryotic type
Other basic domains
RF-X
135556463
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
135556463
NCBI-ProteinID:
XP_064845763
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All DBs
Position
15:54277199..54344533
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AA seq
732 aa
AA seq
DB search
MQSSDGGSDSPSSVVLRTSTSTQAPVVQPVPASQQRVLVQATGSAQKGAQVQQLSVPRVQ
QVPQQVQQVQHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQLYGQGSGGAYFDSQGG
GAQVTTVVSSAGGGPPHGMVGIAMDVGGSQVISGGGTYLIHGGGMDGGRHHASHSSRSSS
AMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQK
LDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQ
QPMHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQQYIDVSHVLPPFPTP
DLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLWQTFWYSTAPSSDVT
TTIPNSDEDMEGVIPREKLMALCKYEPVKLWMRSCDHILYQALVEILIPDVLRPVPSTLT
QAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNT
SQINQMLSDLNRVDFANVQEQASWVCQCDETVVQRLEQDFKVTLQQQSSLDQWAAWLDNV
VNQVLKPHEGSTSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
LVEHRVAQATGETPIAVMGEFSDLNSMLPMLMDKDPSFSDDMSDMGSDEGRGPNEPTVKR
ERIEINHSLQEI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagatggagggtccgattcgccgtccagtgtggtgctgcgtacgtccacc
tccacccaggcccccgtggtgcagcctgtcccagcctcacaacagagggtgctggttcag
gccacgggttcggcccagaagggagcgcaggtgcagcagctgtcagtccctcgggtgcaa
caggtccctcagcaggttcagcaggtccagcatgtttacccctcccaggttcaatatgta
ggagaggggggagaggcagtttacactaatggaaccatccggacagcctactcctataac
cctgaggcccagctgtatgggcaaggtagtggaggagcctactttgactctcagggtggg
ggtgcccaagtcaccacggtggtctcctcggccggcggcgggccgccccacggtatggtg
ggcatcgccatggatgtgggcggtagtcaggtcatctccggtggcggcacctacctgatc
cacggcgggggcatggatgggggtcgccaccacgcctcacactcttcccgctcctcctct
gctatgcttgaaatggcgattgaaaacctccaaaagtctgaagggattgcaactcacaaa
agcagcctgctcaacagccatctgcagtggctgctggataactatgagacagcggagggg
gtgagcctgccccggagctccctctacaaccactacctgcgccattgtcaggagcagaaa
ctggaccctgtcaacgctgcctcctttgggaaactcatccgctccgtcttcatgggcctc
aggacccgccgcctcggcactaggggcaactccaagtaccactactatggcatcagactg
aagccagactcaccactcaacagacttcaagaggactctcagtacatggccatgagacag
caacccatgcaccagaaacagaggttcaagcccctccagaaggtggatggcatgggagac
agcctgtcaggaggctcccagcactcagccagcaccccagagcagtctgtggcagcccag
agccagcatcaccagcagtacattgatgtgtcacatgtcctgcccccgttccccacccct
gacctgggcacccagcccctccccgagcgtatcaacatgaatgacgtgaagaagctgcag
aacctgtacagggaccactgtgaggctactctggatgtggtgatgaacctccagttccac
tacattgagaagctgtggcagaccttctggtattcaacagcgccatctagtgacgtaacc
accaccatccccaacagtgatgaggacatggagggggtgatccccagggagaagctgatg
gctctgtgcaagtatgagcctgtcaagctgtggatgaggagctgtgaccatatcctgtac
caggccctggtggagatcctcatccctgacgtgcttcgccctgtccccagtactctcact
caggccattcgcaactttgccaagagtctggagggctggctgaccacagccatgagcgac
tttcccaatgagattgtacgcaccaaggcagcggtggtgagtgcatttgctcagacctta
cgtcggtacacctctctgaaccacctggcccaggcggcccgcgccgtgctgcagaacacc
tcccagatcaatcagatgctcagcgacctcaaccgcgtcgacttcgccaacgtacaggag
caggcgtcgtgggtatgccagtgtgacgagactgtagtccagcggctggagcaggacttc
aaggtgaccttgcagcagcagagctctctggaccagtgggccgcctggctggacaacgtg
gtcaaccaggtcctcaagccccacgagggcagcaccagcttccccagggctgcaagacag
ttcctgctgaagtggtccttctacagctccatggtgatcagggacctgaccctgcgtagt
gctgctagtttcggctccttccatctcatcaggctgctctacgacgagtacatgttctac
ctggtggagcaccgcgtcgcccaggcaaccggagagacgcccatcgctgtcatgggagag
ttcagtgacctaaactcaatgttgcccatgctcatggataaagacccgtccttctcagac
gacatgagtgacatgggcagtgacgagggccgggggcccaacgaaccgaccgtgaaaagg
gagaggatcgaaatcaaccactcgctgcaggagatctga
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