Oncorhynchus masou masou (cherry salmon): 135556482
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Entry
135556482 CDS
T10723
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135556482
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135556482
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135556482
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135556482
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135556482
NCBI-ProteinID:
XP_064845792
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All DBs
Position
15:55314750..55335130
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AA seq
471 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAIYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQASHELTAAREEGSEVGGHS
RAYSRGSSAALSDLDDITLPDGLLCDLPLTPEGAEREFCNLEMMGGSGGSSSSSQSSPEQ
NRLDFGDSNHHIKHEYQLLHESGLFTHALLNPLPEGFSILEIERITASVVKSHIETSQHG
SEELKRLIWSLYTPEETRSFQSKSAEVMWQQCAIHLTNAIQYVVEFAKRITGFLDLCQND
QVILLKAGCLDVLLIRMCRAYNPINNTILFDSKFASAQTFKALGCDDLVGAVFDLAKSLN
RMQLSEEEMALFSASVLLSPDRPWLTDRQQVQKLQEKVYLALQHCLHRGGSSEEKLAKMV
SKLPMMKSICNLHIDKLEFFRLLHPETAFNFPPLYREVFSSEITFPDSTMD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacaaattgaagtaataccctgcaagatctgtggggacaagtcatcagggatc
cactatggtgtaatcacctgcgaaggctgcaagggcttcttccgacgcagccagcagaac
aatgctatatactcctgttcccggcagaggaactgtctgattgaccgtaccaatcggaat
cgctgccaacactgccggctgcagaagtgcctggccctaggcatgagccgtgatgcggta
aagtttggccgcatgtccaaaaagcagagagacagcctgtatgctgaggtccagaagcac
caggcgtcccatgagttaactgccgcccgtgaggagggaagcgaggttggaggtcacagc
cgggcatacagcagaggctccagtgccgctctcagcgaccttgatgacatcaccctgcca
gacggcctgctgtgtgacctgcccctgacaccagagggcgctgaaagagagttctgcaat
ctggaaatgatggggggaagcgggggtagcagctcctcctctcaaagctcacccgaacag
aacagactggacttcggagacagcaaccaccacatcaagcacgagtaccagctgctgcac
gagtctggcctgttcacacacgcgctgctcaaccctctacccgagggattctccatactc
gagattgaacgtataactgctagtgtagtaaagtctcacatagagaccagtcagcatggc
agtgaggagctgaagaggcttatctggtccctgtacacccctgaggagacacgcagcttc
cagagcaagtctgcggaggtcatgtggcagcagtgtgccatccacctcaccaatgccatc
cagtacgtggtggagtttgccaagcgcatcactggattcctggatctctgtcagaatgac
caggtcattcttctcaaagcaggatgtctggatgtgcttctgattcgcatgtgtcgcgcc
tacaaccccataaacaacactattctgtttgatagcaagtttgctagcgcacagaccttc
aaagctcttggttgtgatgaccttgtgggtgctgtgtttgacctggccaagagcctgaat
cgtatgcagctctctgaagaggagatggctctgttcagtgcttctgttctcctgtcacca
gaccgaccatggttgacagacaggcaacaggtacagaagcttcaagagaaagtatatctg
gctctgcaacattgtctacatagaggtggctcatcagaggagaaactggcaaagatggtg
tccaagcttcccatgatgaagtccatctgtaatctacacattgacaagctcgagtttttc
cgtctgctccacccggagactgcattcaatttcccccctctgtaccgtgaggtgttcagc
agtgaaatcaccttcccagactccacaatggactaa
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