Oncorhynchus masou masou (cherry salmon): 135556543
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Entry
135556543 CDS
T10723
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
omm03029
]
135556543
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135556543
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
135556543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
Motif
Other DBs
NCBI-GeneID:
135556543
NCBI-ProteinID:
XP_064845908
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All DBs
Position
15:58176712..58221733
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AA seq
1340 aa
AA seq
DB search
MSLLRLCALPKCLSGLILLERSVRRVSNAGHCHYFLTLRNNVERRISDPPWTSQRRHFSA
LIPKKEDGKKRVWEQSQLLDVLEARIQQLQSDIVLDVQHAKVQFVNASKSRRGASSGKSH
KNVSGGRTELPKVGQTISKGGGQTGKGGGKDASASKSRWMEKLIHEKTTKTKKLNLKLGI
EDKPVKSRKGKLMLPGTAQKNMLTKAGKKTASTSKKSKTLKNQEPTAIQADTIAGPPVAA
ATVPIRKAKGKGKASKEPAPEFSEARDQELAELERKTEAKAQELAEVEKLERKLNQWAMS
ASPELVQDNSEARMYEGVQLSVHCYLEACVFCGDIDRAQRLLLTHHRMISRRNLLNIGLY
NVMMRVWAKKGSLNQIGRMFILVEEAGLKPNLTSYCAALECMGRTPNCSPKVINRVLRQM
KEDGLCVEELFRLCVFRQDERDMVLRAIHTVEPDFQPSINTVLHTCSSPLVKDFYTERAD
AKYPKLAFSLEELRERFSRQLSMEQACTITIHSVEAMKPVTPHMAKMRALLAEQRMVWHK
ALVGALRESNMILASITPKAVRLSLYPYLCLMDQKDYVDIMIQSLSNLPPSGESLHILAK
ELGNRIHNKFCIRMKSHNQMVDKLSHIYNEYAELLAKDSKDFDVLPRERWWKLEAEHSSG
PSLLGDNTQWPHTVVVELGTYLVDLMVKHMKVNSDILNPANDRKFIPVLYHMYTFRSNKQ
VGFIKPHPILTQMQQDAMETTLTFDSYVMPMLCPPMPWTSAKFGAYLLTPTKMMRTVVGA
NQHEILLEKCQDADLHAVLDSLNQLGNAAWRINQPLLDIIISIFNDKGNEKLDIPPPNSE
APKILRYSQQDLATYSSAEKAHLKRELVKAKKKCSEMHSLRMDALYKLSIANHMRDEVFW
FPHNMDFRGRTYPCPPYFNHLGSDVTRAILVFAEGKPLGPGGLKWLKIHLVNLTGLKKRS
SLAGRLEYANTIMDDILDSADNPLNGKKWWQNADEPWQALACCMEIANAVRSPNPTHFIS
HFPVHQDGSCNGLQHYAALGRDVIGATSVNLIPCEVPQDVYSGVAQQVEEFRARDSEKGL
KIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEVDDFPKEYVWDASHYLVQQ
VFSSLKEMFTGTREIQDWLTESARLIAKSGNTVEWVTPLGLPIIQPYHRTRTQMLKGTIQ
DLSLQITHDSKQKPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYSAGLTFVSVHDCFWTH
ALTVDTMNKVCREQFVALHSQPILQELSNFLLQKYCSGLSSEVKNSKFLEYRRMLLLLAK
VPQTGDFDLQQVKESTYFFS
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctattgaggctgtgtgccttaccgaagtgtctgagtggtctaatattgttggaa
agaagtgttcgtcgtgtgtcaaatgctggccattgccactactttcttacactccggaat
aacgttgaaagacgaatatcagatccaccatggacatcacaacgaagacatttctcagct
ctgatcccaaagaaagaggatgggaaaaaacgagtatgggaacaatctcagcttttagat
gtgcttgaggccagaatccagcaactccaatctgacattgttttagatgtccaacatgca
aaggtacaatttgtcaatgcttccaagtcgaggagaggggcttcttcagggaagagtcac
aaaaatgtttctggggggaggactgagttgcccaaggtgggacagactattagtaaggga
gggggacagactggtaagggagggggcaaagatgcttcagcctccaaatcccgctggatg
gagaaactgattcatgagaagacgactaaaacaaagaaactgaacctgaagctaggcata
gaagataaacctgtaaaaagcagaaaaggaaaactgatgctgccaggtaccgcacaaaaa
aacatgttgacaaaagctggaaaaaagactgcatcgacctctaaaaagagcaagactctg
aaaaaccaagaaccaactgctatccaagccgacactattgcaggtcccccggttgctgct
gcaactgtgcctattagaaaagccaaaggaaaggggaaagcctcaaaggagccggctcct
gagttttctgaggccagggaccaggagctggctgagctggagaggaagacggaggccaag
gcccaggagctggctgaggtggagaagttggagaggaagcttaaccagtgggctatgtct
gccagcccggagctcgtgcaggataacagcgaggccaggatgtacgagggcgtccagctt
agtgtgcattgctacctggaggcctgtgtgttctgtggcgacattgaccgagcccagcgc
ctcctgctcactcaccaccgcatgatcagccgacgcaacctgctcaacataggactctac
aacgtcatgatgagggtctgggccaagaagggctctttgaaccagattggacgtatgttc
attctggtagaagaggcaggtctgaagcctaacctcacctcctactgtgctgcactggag
tgcatgggcagaacccctaactgttctccaaaggtcatcaacagggtcctgcgtcagatg
aaagaggatggcctgtgtgtggaagagctgtttcgactctgtgtgttcaggcaggatgag
agggacatggtgctgagggccatccacaccgtggaaccagactttcaacccagcatcaac
actgtcctgcacacttgctcctcacctctggtcaaagacttctacacagagagggcagat
gctaagtaccccaagttggccttcagcctggaggagctgcgggagaggttcagccgtcag
ctgagcatggaacaggcctgcaccatcaccattcactctgtggaggccatgaagcctgtt
accccacacatggccaagatgagggctttgctggcggagcagcggatggtgtggcacaaa
gccctggttggggccctgagggagagcaatatgatcctggccagcatcaccccgaaggcc
gtcagactcagcctctacccctacctctgtctgatggaccaaaaggactatgtagacatc
atgatccagagtctgtctaacttgccacccagtggggagtctctccacatcctggccaag
gagctgggaaacaggatccacaacaagttctgcatccgcatgaagagccacaaccagatg
gtggacaagctcagccatatctacaatgaatatgctgagctactagccaaagactctaag
gattttgacgtattgcctagggaacgatggtggaagctggaggcggagcatagctctggt
ccctccctgctgggggacaatacccaatggccccacacggtggtggtggagctgggcacc
tacctggtggacctcatggtcaagcacatgaaggtgaacagcgacatcctcaaccctgcc
aatgacaggaagttcatccctgtcctctaccacatgtacaccttccgcagtaacaaacag
gtcggcttcatcaagccgcaccccatcctgacacagatgcagcaggacgccatggagacc
acgctgacctttgactcctacgtgatgcccatgctgtgcccgcccatgccctggacctcg
gctaagttcggcgcctacctcctcacccccaccaagatgatgcgcacggtggttggcgcc
aaccagcatgagatcctgctggagaagtgccaggacgctgacctgcatgccgtgctcgac
tccctcaaccagctgggcaacgcggcctggaggatcaaccagcccctgctagacatcatc
atctccatcttcaacgataaaggcaatgagaagctggacatcccgccgcccaactccgag
gcccccaagatcctccgctacagccagcaggacttggccacctactcctcagccgagaag
gcccacctgaagagggagctggtcaaggctaagaagaagtgcagtgagatgcacagcctc
aggatggacgccctctataaactctccatcgccaaccacatgagggacgaggtcttctgg
ttcccccacaacatggacttccgcgggcggacgtacccgtgcccgccctacttcaaccac
ctgggcagcgatgtgaccagggctatcctggtgtttgcggaggggaagcccctggggccg
ggcggtctgaaatggctgaagatccacctggtcaacctgacgggcttgaagaaacgcagc
tcgctggccggcaggttggagtacgccaacacaatcatggacgacatcctggactctgca
gacaaccccctcaacggtaagaagtggtggcagaatgcagatgaaccctggcaagccttg
gcctgctgtatggagatagccaacgctgtcagatcacctaaccccacacacttcatctcc
cactttcctgtgcatcaggatggttcgtgtaatggtctccagcactacgcagccctgggt
cgggatgtgatcggtgccacctctgtgaacctaattccctgtgaggtgccccaggatgtc
tacagcggggtggcacagcaggtggaggagttccgtgcgcgggactcagagaagggtctg
aagatcgcccaggtgctggagggcttcatcagcaggaaggtggtgaagcagacggtgatg
acggtggtgtacggggtgacgcgctacggaggacgcctccagatagagaagaggctcaag
gaggttgatgacttccccaaggagtacgtttgggacgcctctcactatctggtccaacag
gtgttcagcagtctgaaggagatgttcaccggcaccagagagatccaggactggctgacg
gagagcgccaggctcatcgctaaatcgggcaacacagtggagtgggtgacgcccctgggc
ctgcccatcattcaaccctaccaccggaccaggacgcagatgctgaagggtaccatccag
gacctaagtctccagatcacccatgactctaaacagaagccagacacagtgaaacagaag
aatgccttccctcctaacttcatccactctctggactccacacacatgatgctgactgct
ctctactgctacagcgccggcctgacattcgtctccgtccacgactgcttctggacacac
gcccttacagtcgacacgatgaacaaggtttgccgggagcagtttgtggcactgcacagc
cagcccatccttcaagagctgtccaacttcctactgcagaaatactgctctgggctatcg
agcgaggtcaaaaacagtaagtttttggagtaccggaggatgctgctactactggccaaa
gtgcctcaaacaggcgactttgatctccagcaggtgaaggaatccacttacttcttcagc
taa
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