Oncorhynchus masou masou (cherry salmon): 135556544
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Entry
135556544 CDS
T10723
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Proteoglycans [BR:
omm00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
135556544
Glycosaminoglycan binding proteins [BR:
omm00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
135556544
Lectins [BR:
omm04091
]
C-Type lectins
Lecticans
135556544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135556544
NCBI-ProteinID:
XP_064845912
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Position
2:19517108..19543466
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AA seq
1706 aa
AA seq
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MTRWIVLLCVCLSVTSATFNNYQQISSYEEHSFLDPEDTLSVSVPLELPQRPLLGSTLVL
PCYFQDHTVHDPGAPTIAPLSHRIKWSRITKERVSVILVAMDGEVKVEEDYLDRVHMVGY
PQTPTDASIKITELRSNDTGTYRCEVQHGIEDNHDTVDVLVQGIVFHYRAITTRYTLTFE
KAKAACIQNSAVIATPEQLQAAYDDGFHQCDAGWLSDQTVRYPIHDPRENCYGDKDEFPG
VRTYGVRDVNETYDVYCFAEKMTGSVFYSGSVAKFTYSEAEEQCSKQGALLATTGQLYLA
WQAGLDVCNAGWLGDRSVRYPINVRRPQCGGGLLGVRTVYLHVNQTGYPLPESRYDAYCY
TETDEEGSGMVVPTEAGSGVLSIATVTQGPPEVFFRNMTTESEALGEGLATQKPTSVDFT
FGTDVTELPLPQPPSVTELVVDVVGRVTARPDVGSEIGEVSRSGYLFSATGVVFHYRAGS
SRYAFTFVEAQLACQSVGASIATPEQLQAAYEAGYNQCDAGWLLDQTVRYPIVSPLEKCS
GDLETLPGVRTYGLRPADEHYDVYCYVDRLRGDVFHAGSSEGFTYDGALAHCQELNATLA
STGQLYAAWRQGLDKCRAGWLIDRSVRYPITNPRAACGAGKAGVYTVYTHNNQTGYPDLY
SRYDAYCFKVDILFVANETGLNITEIEEALVNLTSITDLLRPVLPSITPPISVESSGSGS
GASGASGSSGDLSGDHSGELPHSGDLSGSGDLSGSGSAEIPSGSSGLSSGDASGSGLSGD
GSGITVTSGRGIVLSGLGSGGPQEAGEGITVTFSSGSGSVLSGLGSGGPQEAGEGITGIL
TFPTEMGLGMFSGSGFLSGSGSGSGVSSEESGSSSDSSSSSGESGELSGMSSGSSSSSSE
EFSGFPSGFFPSGGSSGHSGEESGSGDTQVLLIDGKLVEVSTSHTHKEKELGGGGLEFSG
SGSGSSGSGFFPSVTFLGSGFTDLTGSASGEQEASGSLHYGSGSGDISGSASGSSGSGFF
PGVTFLGSGFTDLTGSASGEQEALGSLHYGSRSGDNSGSDSGSSGSGSFPGVTFLGSGFT
DLTGSASGEQEASGSLHYISGSGDISSSDSGSSGSGFFPSVTFLGSGFTDLTGSASGEQE
ASGSLHYVSGSGDISGSASGSSSSGFFPGVTFLGSGFTDLTGSASGEQEASGSLHYTSGS
GDISGSASGSSGSGFFPGVTFLGSGFTDLTGSASGEQEASGSLHYGYGAGRGGYASGFGK
SGFPSGDMSGISRSSTSDDEDSAVTFLTNDFMTEASKATTVSMELGAGPVQFSGQGSGSH
TWSGADHPTQASGVSSGAHSGDLFPVVLSSPPSNRELMEGTEGLEEAMAGRAELGETTSE
FYVTFAPDLAPAGLAAPAISLQTPAVMEEPSSEEGIPNPCDPNPCGAGSCSVEDGVGLCQ
CPPGKVGEGCQYEVDVCHSNHCANGATCVENADSYKCLCLPSYGGDRCEIDEQDCEEGWT
KFQGNCYMHFPERETWLQAEQRCRDLSAHLVSIITPEEQHFVNSNGQDYQWIGLNDKTVE
NDFRWIDGTPLQFENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKTGPV
YCGAPPEVENAKMFGSRREQYTVGSIIRYRCNPGLLQRHLPVVRCMADGQWEKPQVECMG
AVPSPSNRIQRRSIRRRGESTSSKRH
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggtggattgtattactttgtgtttgtctgtccgtcacctcggcaacattcaac
aattatcagcaaatcagcagctatgaggagcactcctttctggaccctgaggacacactg
agtgtgagcgtccccctggagctgcctcagcgccctctactgggcagcaccttggtacta
ccctgttacttccaggaccacaccgtccacgaccccggcgcccccaccattgcccccctg
tcacaccgcatcaaatggagccgcatcaccaaggagcgtgtctctgtcatcctggtggcc
atggacggagaggtcaaggtggaggaggactatctggaccgggtccacatggtgggctac
ccccagacccccactgacgccagcatcaagattacagagttgaggtccaacgacaccggc
acctaccgatgtgaggtccagcatggcatcgaggacaaccatgacactgtggacgtcctg
gttcaaggtatcgtgtttcactaccgggccatcacgacacgctacactctgacctttgag
aaggccaaggcagcctgtatccagaacagtgctgtgatcgctaccccagagcagctccag
gccgcgtacgatgacggcttccaccagtgtgatgccggctggctctctgaccagactgtc
aggtacccaatccatgatccacgtgagaattgctatggcgacaaagacgagttccctggg
gtgcgaacctacggagtgagagatgtcaacgagacttacgacgtgtactgttttgccgag
aagatgacaggcagtgtgttctactctggctctgtggctaagttcacctactctgaggct
gaggaacagtgtagtaagcagggggccctgttggccaccacaggacagctgtacctggcc
tggcaggctggtctggatgtgtgcaatgcaggctggctaggagacaggagcgttcgctac
cccatcaatgtccggaggccgcagtgcggagggggtctgctgggggtacggaccgtgtac
ctccacgtcaaccagacggggtaccccctccccgaatcccgctatgatgcctactgctac
acagaaacggacgaggagggctcaggcatggtggtgcccaccgaggcgggcagcggcgtg
ctgagcattgccacggtgacccagggtcctcccgaggtgttcttcaggaacatgaccaca
gagagcgaggcgctgggcgagggcctggccacccagaaacccactagcgtggacttcacc
ttcggcactgatgtcaccgagctgcccctaccacagccgcccagtgtgacagagttggtt
gtggatgtggtggggagagtaacggccaggccggatgtggggagtgagatcggcgaagtg
agcagatcaggatatttattttctgctacaggcgtggtgtttcactaccgtgctggatct
agtcgctatgccttcaccttcgtggaggcccagctggcctgtcagagtgttggagcctcc
atcgccaccccagagcagctccaggctgcctatgaggccggctacaaccagtgtgatgca
ggctggcttctggatcagaccgtcaggtatcccatcgtgtctcctctggagaagtgctct
ggggatctggagactttaccaggagtgaggacctatggactgaggcccgctgacgaacac
tacgatgtgtactgctacgtggacagactcaggggtgatgtgttccatgctggctccagt
gagggcttcacctatgacggtgctctggctcactgtcaggagctcaacgctaccctggcc
tctactggccagctctacgccgcctggagacaaggcttggataagtgccgcgcaggttgg
ctaatcgaccggagtgtccggtaccccatcaccaacccccgggcggcgtgtggtgcaggg
aaggcaggggtgtacacagtatacacccacaacaaccagacgggatacccagacctgtat
tccagatatgacgcctactgcttcaaagtggacatcttgtttgtcgccaatgaaactgga
ttgaacatcacagagatagaagaggctttggttaacctcacatccatcactgatttgctg
aggcctgtcctgccttccatcactcctcccatctctgtggagtcctcaggctctggttcc
ggggcctctggggcgagtggatcctccggagatctctctggtgatcactccggtgaactg
cctcattccggggatctgtccgggtcaggtgatctttcaggcagcggaagcgcagagatt
cccagcggatcatctggtctgagtagtggagatgcgtccggctcggggctgagtggagac
ggatcgggaataacggtcacttcagggaggggcattgttttatccggtttgggctctggg
ggtcctcaggaggctggagagggaataacggtcaccttctcttcagggagtggcagcgtt
ttatccggtttgggctctgggggtcctcaggaggctggagagggaatcactgggatcctc
accttccccacggaaatgggattgggaatgttcagtggcagtgggttcctgtcgggatcg
ggaagtggctccggtgtcagttctgaggagagcggctcttcgtctgacagctccagcagc
tctggggaaagtggggagttgtctggaatgtcgtccggctccagctctagttccagtgag
gagttttccggatttccctcaggattctttccctcaggaggctccagtggtcattcggga
gaggagtcgggaagcggagacactcaggtcctgctgatcgatggtaaactggtggaggtt
tccacctctcacacacacaaagagaaggagctgggtggagggggcctggaattcagcggc
tccggatctggcagcagtggctcagggttcttcccgagtgtgaccttcttggggtcaggg
tttactgaccttacggggtcagcctcaggggaacaggaggcctcggggtctctccactac
ggctctggaagtggtgatatcagcggttcggcctcgggcagcagtggctcagggttcttc
ccgggtgtgaccttcttggggtcagggtttactgaccttacggggtcagcctcaggggaa
caggaggccttggggtctctccactacggctccagaagtggtgataacagcggttcggac
tcgggcagcagtggctcagggtccttcccgggtgtgaccttcttggggtcagggtttacc
gacctcacagggtcagcctcaggagaacaggaggcctcggggtctctccactacatctcc
ggaagtggtgatatcagcagttcagactcgggaagcagtggctcagggttcttcccgagt
gtgaccttcttggggtcagggtttactgaccttacggggtcagcctcaggagaacaggag
gcctcggggtctctccactacgtctccggaagtggtgatatcagcggttcggcctcgggc
agcagcagctcagggttcttcccgggtgtgaccttcttggggtcagggtttactgacctt
acggggtcagcctcaggagaacaggaggcctcggggtctctccactacacctccggaagt
ggtgatatcagcggttcggcctcgggcagcagcggctcagggttcttcccgggtgtgacc
ttcttggggtcagggtttactgaccttacggggtcagcctcaggggaacaggaggcctca
gggtctctccactacggatacggagcgggaagaggtggatacgcatcagggttcggaaag
tcgggcttcccatccggggacatgtctggaatctccagatcctccaccagcgatgatgag
gacagcgctgtcaccttcctgactaatgacttcatgacagaggcttccaaggcgaccaca
gtttccatggagctgggggctgggccagtgcagttcagcgggcagggaagtgggtcccac
acatggagcggtgctgaccacccaacccaggccagcggtgtctcatctggggcacactct
ggagatctgttccctgtggtgctgtcctctccgcccagcaacagggagcttatggagggc
acagaagggctagaggaggccatggctggcagggctgagctaggggagaccaccagcgag
ttttacgtgacctttgcccccgaccttgctcctgccggattggctgccccagccatctcc
ctgcagacccctgccgtcatggaggagccatcctcagaggagggtatccctaacccatgt
gaccctaacccgtgtggtgctgggtcatgctcagtggaggatggtgttgggttgtgccag
tgtccgcccgggaaagtgggagaagggtgccagtatgaggttgatgtgtgccattccaac
cattgtgccaatggagccacctgtgtggaaaatgcagactcttacaaatgcttatgcctg
cccagctacggaggggaccgctgcgagattgacgagcaggattgtgaggaggggtggact
aagtttcagggcaactgttacatgcacttccccgagagagagacctggctgcaggccgag
cagcgctgccgagacctcagcgctcacctggtcagcatcatcaccccagaggaacagcac
tttgtcaactccaacggccaggactaccagtggattggactcaatgacaagacagtggag
aatgacttccgctggatagacggcacaccactgcaatttgagaactggcggccgaaccag
ccggataactactttaactctggagaagactgtgtggtgatgatctggcacgagaacggc
caatggaacgacgttccctgcaactaccacctgcccttcacctgcaagactggcccagtc
tactgtggcgctccgccagaggtggagaatgccaagatgttcggcagcaggcgggagcag
tatactgtggggtccatcatccgctaccggtgtaacccaggcctcctacagcgccacctg
cctgtggtgcgctgcatggcagacggacagtgggagaagccacaggtggaatgcatgggc
gcagtgccctcccccagtaacagaatacagcgcagatcgatcagaaggcgaggagaatca
accagcagcaaacgtcactaa
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