Oncorhynchus masou masou (cherry salmon): 135556549
Help
Entry
135556549 CDS
T10723
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
135556549
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135556549
Prokaryotic type
135556549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135556549
NCBI-ProteinID:
XP_064845916
LinkDB
All DBs
Position
15:complement(58984196..58997262)
Genome browser
AA seq
649 aa
AA seq
DB search
MADAEPMLVPAPGGEKRACPALEDEVAHSTKRPRVQKDENKGGHSHKPAQDEAEEPEAEE
TEPLEEEDGEGAGLGSGEAFAEMMKHGLTELDVGILKFVSEHKGFSGILKERYSDFVVHE
VNKEGKTVQLDDLSVPEEAEEASVAEQPGSEVFTEEQKHELEQLQLFKKKEGNVSIEMAD
DTKENRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQKALAEVKIAAAPRKHSWPK
SRGAFCHFVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAVTVQEIAVLKVTAER
LFHLNKCLNNFKLGNFCYKKHPLKLGELRGNHFTVVIRNITGTDDQVQQAMTSLRETGFI
NYYGMQRFGTTAVPTHQVGKAILQDNWNEVIDLILKPRPGAEKGYLVKCREEWAQSQDPE
AALKKLPVKCCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRI
EAFGLKAVEGDLVLRGGTAFVLSAAEAETHSIQEVVMPLPGFDVIYPTHHVGKGYREKLS
ADNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYDDPRISLVHTDVEKLEDQPPP
VFNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTIWLN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagagcccatgctggtccctgcccctgggggggagaaaagggcctgccct
gccttggaggatgaggtggcccacagcaccaagagacccagagtccagaaggatgagaac
aaaggaggacactctcacaagccagcccaggatgaggcagaagagccagaggcggaggag
acagagccactggaagaggaggatggagaaggggccgggttaggttctggagaggctttt
gcagagatgatgaagcatggactcacagagctggatgtggggattctgaaatttgtcagt
gaacacaagggcttctctgggatcctcaaggagaggtactctgactttgtcgtacatgag
gtcaacaaagaaggcaagacggtgcagttggatgatctctcggttcctgaggaggctgag
gaagccagtgtggcagagcagccagggtctgaggttttcacagaggagcagaaacacgaa
cttgagcagctgcagctcttcaagaaaaaagagggcaacgtgtccatagagatggcggat
gacaccaaagagaatcggaccctggtccacaaagctgtcaagaccctgtaccctggactg
gagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagccggg
cagaaagcactcgcagaggtcaaaatcgctgcagcccccaggaaacactcctggcctaag
agccgtggggccttctgccactttgtcctttacaaagagaacaaggacaccatggaggcc
atcaacgtgctgtccaagttcctcaggatgaggcctaatgtgttctcttacatggggacc
aaggacaagagagccgtcactgtgcaggagattgcagttcttaaggtcacagcagaaaga
ctgtttcaccttaacaagtgcctcaataacttcaagctgggaaacttctgctacaagaaa
caccctctgaaactgggggaactacggggaaatcatttcactgtggtcatcaggaacatc
accgggacagatgaccaggtccagcaggccatgacctccctcagagagacaggctttatc
aactactacggcatgcagcgctttggcaccactgccgtgcccacacaccaggttggcaaa
gccatcctgcaagacaactggaatgaagtgatagatctgatcctgaagcctcgccctgga
gcggagaaaggctacctagtgaagtgtcgtgaggagtgggcccagtcccaggacccagag
gcagcgcttaagaagctacctgtgaaatgctgtgtggagggacagctgctccgaggcctc
tctatgtacggcaagaagaacatcatcactgcatttgccatgatccctcgtaacaaccgg
ctgatgtacatccacagctaccagagttttatgtggaacaccatggtcagcagacgcatt
gaggccttcgggctgaaggctgtggagggagacctcgtgctcagaggaggcactgcgttc
gtgctgtctgcagccgaggcagagacccactctattcaggaagtggtgatgcccctacca
gggtttgatgtcatctaccccactcaccacgtggggaagggctacagggagaagctgagt
gcagataacctggacattgacaacatgagacacagggtgagggactactctctggccggg
gcctaccgacgcatcctcatcaaacccagtgacgtcagctgggaggtgattaactatgat
gaccctcgtatctctctggttcacactgatgtggagaaactagaagaccaacctcctccg
gtcttcaacaaagaggggaagtacagggctttgaggatggagttctctctgcctccctcc
acctatgccaccatggccatcagagaggtgctcaagatggacaccagcatcaagaaccag
acccagctcaacaccatctggctcaactaa
DBGET
integrated database retrieval system
