Oncorhynchus masou masou (cherry salmon): 135556588
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Entry
135556588 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.S-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135556588
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135556588
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135556588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
zf-RING_5
zf-rbx1
EIF3I
zf-C3HC4_3
zf-C3HC4_2
Beta-prop_WDR3_1st
zf-C3HC4_4
zf-RING_11
Beta-prop_WDR3_2nd
zf-RING_Vps41
Beta-prop_WDR75_1st
WD40
zf-ANAPC11
CFAP43_N
Rtf2
WD40_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Zn_ribbon_TiaS
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
zf-UDP
DUF6779
Motif
Other DBs
NCBI-GeneID:
135556588
NCBI-ProteinID:
XP_064845978
LinkDB
All DBs
Position
15:60840564..60863952
Genome browser
AA seq
713 aa
AA seq
DB search
MEAMEVDLQLGVPRREPEPDAMAGNVDPPIIIPDPGSETEDEADAAPLDPPRLPTTWAFS
QNRIRVEGQVGPRIRMEGHIVHRVTTAAVLRQRRARPGVRALYPTQTSPSASRFLDFLLR
VPAANPDSGNTTESSESEDEADPTGPVDPHNPDEPAVPSSLGMNPPVAATPLQGPNPSDS
NATTEAVRTETGNQVNPESVTAPVATSGAALRSSQGDEGEGETCSICFEPWTTSGEHRLA
TLRCGHLFGYTCISRWVKGQGQGAKCPQCNKKAKRSDIVLLYARKLRALDNTEQENMKRS
LEQEQSMRRNAELESAKCRLQLQVMTDECGKLRKQIQELKTLMAQPGCRPSKNSGASLSG
LSQRQDSTQGGHYVFSKAVLVSQAGGCRVLSYCEPLSCLLASHPSPHTTLVPGYGVKKVS
TVNMKACQYVPIHVKQIRGLAFNRQADSLLLSAALDNTIKLTSLMTNTVVQTYNTGKPVW
SCCWCLDNNNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRCPVASLSYVPRASSSSFP
CGGLIAGSLEGGCFWEQVDGTTYRPHVLPLETGGCTDIQVEPESRRCLVTYRPGRSNPSL
RCVLMELSRTLQQDAAQEPLCSCYPVQTFSAGSSCKVLTKNAVFRSPAGEGSTLVCAGDE
STNSTMVWDAGSGSLIQKLPADLPVLDICPFEMNQDSYLASLTEKMLKIYKWE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatggaggtggacttgcagctgggggtccccaggagggaaccagaaccagat
gctatggcaggcaatgtagatccccctatcatcatccctgaccctggcagcgaaactgag
gacgaggcagacgcggctcccctagacccaccacgactcccgaccacctgggcgttcagt
cagaaccgaatcagagtggagggtcaagttgggcccaggatcagaatggagggtcatatt
gtgcacagggtcactacagcagcagtcctgaggcagcggagagccaggccaggcgtcagg
gcgctctaccccacccagacctctccctctgctagccgcttcctagatttcctgctgcga
gtccctgcagccaaccctgactctggtaataccacagagtcgagcgagtcggaggatgag
gcagaccccacagggccagtagaccctcacaaccctgatgaacctgctgttccctccagc
cttggaatgaaccctcctgtggcagccacgccactgcaaggcccaaatccttcagattct
aatgcaaccacagaggctgtgaggacagagactggaaatcaagtgaatcctgagagtgta
acagccccagtggccaccagtggtgcggctcttcggtcgtcccaaggggatgagggggag
ggggagacctgctctatctgctttgagccctggaccacgtcaggggagcaccgactggcc
accctgcgctgcggacatctcttcggctacacctgcattagccgctgggtgaagggccag
ggccagggagccaagtgtccccagtgcaacaagaaggccaagcgctctgatatcgtcctc
ctgtatgcacgcaagctgagggctttggacaacacagaacaggagaatatgaagaggtca
ttggagcaggaacagtcaatgcgtaggaatgctgaactagagtcagccaagtgccggcta
caactgcaggtgatgacagacgaatgtgggaaactacgcaagcagatacaggagttgaag
acgctgatggctcagcctggctgtaggccttctaagaactcaggggcctctctctctggg
ctctcacagagacaggacagcacccaggggggccactacgtcttctccaaggccgtgcta
gtgtcccaggcggggggctgcagggtgctgtcctactgtgaacccctcagctgcctgctg
gcctcccatccctccccacacaccacactggtgcccggctatggtgtgaagaaggtgagt
acggtgaatatgaaggcatgccagtatgttcccatccatgttaaacagatcagaggcctg
gcattcaacagacaagctgacagcctcctgctctctgctgccctggacaacaccatcaaa
ctcaccagtctaatgaccaacacagtggtgcagacgtacaacacgggtaagccagtgtgg
agctgttgctggtgcctggacaacaacaactacgtgtacgctggtctcagtaacggctct
gtgctggtgtatgataccagagacaccagcacacatgtccaggagctgcagccactacgc
tctagatgtcccgtggcctcactgtcctacgtgcctcgcgcctcctccagctcgttcccg
tgcggcggcctcatcgcaggttctctggaggggggctgcttctgggagcaggtggacggc
accacttacagaccccacgttttgcccctggagacaggaggctgcacagacatccaggtg
gagccagagagcagacgctgtctggtcacctacagaccagggcgctccaacccgtctctg
cgttgtgttctgatggagctgagcaggactctacagcaggatgcggcccaggagcccttg
tgttcctgctaccctgtccagaccttcagcgccggctcctcatgcaaagtgctcaccaag
aacgctgtgttcagaagcccagccggggagggctccactttggtctgtgccggggacgag
tccactaactccaccatggtgtgggatgcagggagtggatccctgattcagaagttgcct
gctgacctcccagtgttggacatctgcccgtttgagatgaatcaggacagttacctggcc
tcgctcactgagaagatgctcaaaatctacaagtgggaataa
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