Oncorhynchus masou masou (cherry salmon): 135556594
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Entry
135556594 CDS
T10723
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135556594 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135556594 (lsp1a)
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
135556594 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
135556594
NCBI-ProteinID:
XP_064845987
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Position
15:complement(61246610..61283737)
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AA seq
592 aa
AA seq
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MSHAILRRNSSKQGLQNLLKITTQRSVEDAEEVERERRRRARESFRSMGSSSTLGPGGHS
LDNGALAEDGLYERDLKPSSSSPSMEEDEGFSDWTQRLERRRQQAQRMEELSQATEEQDQ
RPLNGAAKPPTPHTLSGSATPTTSTSRQQRHKAEVEDEEEKKWGRKESERKGREREEEVV
REEREREEEAEKQRQEQMRVLKKREEDQRSDAGEKVKEKRKEVKVSYTSKVVLHTEAKHG
NVNGDTAGEKVTSYMVKTKLRAPRAVVQMAAAEAEEEAILETEAKLEKIRRSHAKKENQE
LEQLKHKQAEAEQELEELKRRREERRQVRKEEERRSREEEQLRLAKEEEEKRRMKEDIER
RRMEAAERMKSLSTSSVDGDEMFSSLSPKGSIYKITERTESLNRSLKKSNSFKKTQPPVL
LAKIDDRLEQYTTAIEYSQEVKATKQGLTDIPMSPEPVSSKKNLFEAGEAWNQSLAKGTP
PKQDAESLKVGVADMITQWVKGNPDGTSRSSPSRPADVKAGDVMQKKNMWEIIGETSPGI
SGAVAKGNASGKKYKFVMTAHGKYEKIPVDDDDDENMDEYTNGKADLYHGDY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgctatcctgagaagaaactccagcaagcaaggtttgcagaacctcttgaaa
ataaccacccagaggagtgtggaggatgcagaggaggtggagcgagagcgtcgacggagg
gcccgggagtccttccgcagtatgggcagcagcagtaccttgggccctggaggccactca
ctggacaatggggccttggcggaggatggcctgtatgagagggatctgaagcccagcagc
agctctccctctatggaggaggacgagggcttcagtgactggacccagcggctggagaga
cgcaggcagcaggcccagcgcatggaggagctcagtcaggccacagaggagcaggaccag
aggcccctgaatggtgccgcaaagccccccacaccacataccctctctggctcagccacc
cccaccacatccacctctcgccagcagagacacaaggcagaagtggaggatgaagaggag
aagaagtggggaagaaaggaaagtgagaggaaagggagggagcgagaggaggaggtggtt
agagaagagagggaaagagaagaggaggcagagaaacagaggcaggagcagatgagagtg
ctgaagaagagagaggaagaccaaagatctgatgctggggagaaggtgaaagagaaacgc
aaagaggtgaaggtctcgtacacatccaaagtcgtcctccacacggaggcaaagcatggc
aacgtcaacggagacacagctggggagaaagtgacatcatacatggtcaaaaccaaatta
agggctcccagggctgtggtacaaatggcagctgcagaggctgaggaggaggccatcttg
gagacagaggccaagctggagaagatccgacggagccatgctaagaaggaaaaccaggag
cttgagcagctcaaacacaagcaggctgaggccgagcaggagctagaggagctgaagagg
aggagggaggagagacgccaggtcaggaaggaagaggagcgcaggagcagagaggaggag
caactgcgtctagccaaggaggaggaggagaagaggaggatgaaggaggacatagagagg
aggaggatggaggcagcagagcggatgaagagcctcagtacctccagcgtagacggagat
gagatgtttagctcgctcagtcccaaaggctccatctacaagatcacagagcgaacggaa
tccttgaaccgatccctaaagaaaagcaacagcttcaagaagacacagccccctgttctc
ctcgccaagatcgatgacaggctggagcaatacaccaccgccatcgagtactcccaggag
gtcaaggcaaccaaacagggcctgacagacatccccatgtcacccgagccagtgtcctcc
aagaagaacttgtttgaggctggagaggcctggaaccagagcctggccaaaggcacacca
cccaagcaggatgctgagagtctgaaggtgggcgtggcggacatgatcacccagtgggtg
aaggggaacccagatggcaccagcaggagctccccctcaagaccagctgatgtaaaagct
ggtgacgtgatgcagaaaaagaacatgtgggagatcattggagaaacatcccctgggatt
tcaggagcagtggcaaagggcaatgcatctggtaaaaagtacaaatttgtgatgactgct
catggcaaatatgagaagatacctgttgatgatgatgatgatgaaaatatggatgaatac
acgaatggaaaagcagacctataccatggtgattattga
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