Oncorhynchus masou masou (cherry salmon): 135557392
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Entry
135557392 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: CASP8-associated protein 2-like
KO
K25593
CASP8-associated protein 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135557392
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
135557392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
SHE3
Myb_DNA-binding
YabA
MscS_porin
Motif
Other DBs
NCBI-GeneID:
135557392
NCBI-ProteinID:
XP_064846687
LinkDB
All DBs
Position
16:complement(7451146..7462316)
Genome browser
AA seq
2078 aa
AA seq
DB search
MEGDLMDDVYGDLSQDHHNTTAAFNEDSVDIYFGLESPKMNSSAERNYTLLSPQNLKYMD
LYEEMITEEQQDRESSYNELRTRFNAAQSQVDELMRRLQQTETQNTTLNTENSRLKKNIC
ALIKTAKMEVVRKDEEINRLSQSFRPRRGPVVHHQSQMNCLRNQIPTRLNPTGPSQLSQP
QVPNRLNPTGQSQPSQPQVPTRLNPTGPSQLSQPQVPNRLNPTGQSQPSQPQVPTRLNPT
GPSQLSQPQVPTRLNPTGPSQLSQPQVPTRLNPTGPSQLSQPLVPTRQNLTGQPPPSQPP
GPRQDCVVKDLSQLLCKDRDVVHPLLPPTPSDATVFRPPLPVTSKTAKGDSEAPVKRTVG
SSSQDSVNRHPTRELEPKQTKHREGGGGNPRLSDSNEQRKYNSKSSRCPRLSDVEVRRRS
ERAKNPTSDILHCTASSERTSEGLSKDCAAYQSKGSSRHYQELRRDKGDGNRHSRGTKDI
SSNRKHAYLNQASVTERSSESFNRKGGTSPPRDRRRKEERRREDEVRKEKNTSKKSGERK
STCTERRRTKESGRRSKDKTMDDSKVGGQKTGEKSEFLPSEAKVAAKSSVEETGPNRKLS
FMETLNLTLSPVKKPRQLAETKEREGTPPEEVPEDQSAEDSGQPDLDKLLILDEINSSVV
ETDEVFEDPVVQPSSEIPMSSEPGSIDLRHTDKEPCQDANKGLTEATVAKKQPKCQLEVG
DTIVQGVSEGKPELPEATVDQRTEPTTPEPLRGXSVSAPDCAIVLRTPLKSRPEECASAN
KVSESDDFTAAAVTAPTVAGNCGNNLNTDTGLSSNGFTPDHSMENVVLITENWVCKPNGK
TPSALVCESQAVETVTHVPPAAVCVGHPAVEGVPGKEPSESLQLPLPASVISTSSLDVTA
EVQGLSKHGVSSTISMEVIPEICITSEIVEDATEIPLECEKERTVVEQGSPLSGFEVSKV
SSTTGEVSPSAQHNSGLSQTPKKSLNSEPSHTENEDMNVEPSSSIPLAHDENSMMLTLGS
LKGIPDAISPLTSPVRPMRKSHQPPCHSKPAYVKSLRKEFTIAAGDPNSKKLDVNMENKN
PGRSIASATQQAVDRASVRSSSPEDELEEGEILSEGEETPFTPSSPAKTVRPTSTVKSQQ
IPKSSPRLSKKSLDEKGNSKLLSKTLISPVGSPMSKARYKTVQPLLPKAALCTVEEVMAM
FVKIRYACRKKYMKLRSTFSKERFCGVMDMSLDSFTDFVDSVSFTKLCSQEDDLKVKLKN
NIMSVLSKLSNNGIVNRIFDQEPLNMKSKLWEFVNVQLDFLFKEIQTALRSVCKSSNGNQ
SAGAEKRDLSLSKQPVKSPKQPVKSPKQPVKSPKQPVKSPKQPAKSPKQPAKSPKQPVKS
PKQPVKSPKQPVMSSVSTASKLKRPQGAVQKTSCVSRTSASKRPREELTECVEPNIKRTR
AQTLPPCKTGLGRGKNIKMSFEEDKESEPQTSDHPLMQPPLQHGLEISSSNSPLSAEKTA
AYVRRLSQNGSLHDKSDFEILTEQQASNLTFNLVTDSQMGEIFKCLLQGSDLLETNVSAG
DNQGWPLGTPRKGERFRGVTTPSKVCTTTKVGTPSKVIATWSSISPCKFSSLNSKVQIPL
NPALLDESCMLEVPSSLPEDKMTSQSSVFSQRSYSILAEDLAVSLTIPSPLKSDSHLSFL
HPASVEPMSAPDSVISAHFSEDALMDGEDATEQDIHLALDTDNSSGASSGGGRTREAPVN
PLFHFKPHLPMQAVVMEKSNDHFIVRIRHANTSPDINSNNSGVNFTNLGINCTNPGINFS
NLGNNSTSLVVNPTCLGIKSTSQGVNSSSPGSVNSTYPGNNSTNKDTNSSYPCVNSTSPQ
ANCTNPGIYPISADINPRAVSSPQTPPGEEQHGKDQGKTPSKTHFSKASPPFYLSTSTET
ASALSSPCLTIIEDTPERDHSKGKTGKKRTRHHVEMKAKRPKKEVISEKIKHKKKSSKRA
KGKETRSSKSERSKVTTPPQSTPSPNSLSAKNIIIRKGAVVVTWTRDEDRDILLALKMKG
ASPDTFSSLSEKMNKTPAQIAERFSQLMKLFKKKKMMS
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atggagggggatttgatggatgacgtgtatggtgacctcagccaagaccaccataatacc
acagcagctttcaatgaagactctgtggatatttattttggtttagaaagtccaaagatg
aattcgagcgcagaaaggaattacacactcctctcaccacagaatctgaaatatatggat
ttgtatgaagaaatgataacagaggaacagcaggacagagagtcttcctacaatgagttg
aggacaagattcaatgcagcacaaagccaagttgatgagttaatgagaaggttgcagcag
actgaaacacagaatacaacgctgaacaccgagaacagccgcctgaagaagaacatctgt
gcgctcatcaagacagctaaaatggaggttgtgcggaaggatgaggagataaataggttg
agccaaagtttcaggccaaggaggggtcctgtagttcaccatcaatctcagatgaactgc
ctgagaaatcaaattccaacccgactgaatcctacggggccgtctcaacttagccaacca
caagtcccaaaccgactgaatcctacggggcagtcacaacctagccaaccacaagttcca
acccgactgaatcctacggggccatctcaacttagccaaccacaagtcccaaaccgactg
aatcctacggggcagtcacaacctagccaaccacaagttccaacccgactgaatcctacg
gggccatctcaacttagccaaccacaagttccaacccgactgaatcctacggggccatct
caacttagccaaccacaagttccaacccgactgaatcctacggggccgtctcaacttagc
caaccactagttccaactagacagaatcttacagggcagcctccaccaagccaacccccg
ggtcctagacaggattgtgttgtaaaggatcttagccagctcctctgtaaagacagagat
gtggtccacccccttctccctccaaccccctctgatgcaacagttttccgaccacctctt
cctgtcacttcaaagaccgctaaaggagattcagaagctccagtgaaacgcactgttggt
agttccagccaggactctgtgaatagacaccctacacgtgaacttgagccgaaacaaacc
aagcacagagaaggcggaggtggaaatccgaggctgtccgactcaaatgagcagcgaaaa
tataactccaagtcaagcagatgccctcgtctctcagatgttgaggtacgcaggagatca
gagcgggccaaaaatccaacctcggacattttgcattgcactgcttcctctgaacgcact
tccgaaggattgtctaaagattgtgcagcctatcaatcaaaaggttctagtcggcattat
caggagctcaggcgtgataagggtgatggtaataggcatagtagaggtactaaagacatt
tcctctaacagaaagcatgcctatttgaaccaagccagtgtcactgaacgatccagtgaa
tcttttaatcgcaagggagggacaagtcctccaagggaccgtcgaaggaaagaggagaga
agaagagaggatgaggtcagaaaagaaaagaatacatcaaaaaaatcaggagaaagaaaa
agcacttgtacagagagaagaagaacaaaggaaagtggccgacgcagtaaggacaagaca
atggacgacagtaaagtcggggggcaaaagacaggtgaaaagtctgaatttcttccatct
gaagctaaagtggctgcgaaaagctctgtagaggaaaccggtccaaacagaaagttaagt
ttcatggaaactctgaatcttaccctgtcaccagttaaaaaaccaagacagcttgctgaa
accaaggaacgggagggcacaccacctgaggaagttcctgaagaccagtcagcggaagac
agtggacagcctgatctagacaagttactcatcttagacgaaatcaacagcagtgtggta
gagaccgacgaggtcttcgaggacccagtggtacagccctcttcagaaatcccaatgtct
tcagaacctggaagtattgaccttagacatacagacaaagaaccttgtcaggatgctaac
aaaggtctgactgaggccacagtggccaaaaagcaacctaagtgccagttagaagtggga
gacactattgtccaaggtgtctctgaaggtaagcctgagctgccggaggccacagtggat
cagaggactgaacccaccacaccagaacctctcagggggnttagtgtttcagctccagac
tgtgccattgttttgagaacgccactgaaaagcagacctgaagaatgtgcctctgcgaat
aaagtgagtgagtctgatgattttactgctgctgctgtcactgctcctactgtggctggg
aattgtggaaacaatttaaatactgacactggcctatcgtctaacggatttacccctgac
cattcaatggaaaatgtcgttcttattactgagaattgggtgtgtaagccaaacggtaaa
actcccagtgctttggtctgtgaaagtcaagctgttgaaactgtgacacatgttccaccc
gctgctgtctgcgtgggacatcctgctgttgaaggtgttccaggaaaagaaccatcggaa
tctctgcaattgccactgcctgcctctgttatttcaacctctagtctagacgtgacagca
gaggtgcaaggtctttccaagcatggtgtttccagtacgattagcatggaggtaattcca
gagatctgcattacatctgagatcgttgaagatgccacagagatacctctggagtgtgag
aaagagaggactgttgtggaacaaggttcaccgttgagcggttttgaagtgtctaaggtg
agcagcacaacgggagaggtttcaccatcagcacagcacaacagtggcttgtcacaaacg
ccaaagaagtccctcaattctgagccaagtcacacagagaatgaggacatgaatgttgag
ccctctagctccattccattggcccatgatgagaactcgatgatgcttacactgggcagc
cttaaaggtattccagatgccatcagcccactcacaagcccagtccgtccaatgaggaaa
agccatcagccgccatgtcacagcaaacctgcttacgtcaagagtcttcgcaaagagttt
accattgctgctggggatcccaattcaaagaagttagatgtgaatatggagaacaagaat
cctggccgctccattgcaagtgctacacaacaagctgtggatcgggcttctgtccgttct
tccagccctgaggatgaattggaagagggtgaaattcttagtgaaggggaagaaactcca
ttcacgccaagttctccagccaaaacggttaggcccacaagcacggttaaaagtcaacaa
attcccaagtcatcccctaggctttccaagaagtcgcttgacgagaaagggaattctaaa
ctcttaagtaaaaccttgatttcaccagttggaagccccatgtcaaaagctcgctataaa
acggttcaacctctgttacccaaagctgccttgtgtaccgtggaggaggttatggccatg
tttgtaaagatccgctatgcatgcaggaaaaagtacatgaagcttcgttcaaccttctct
aaggaacgcttctgtggtgttatggacatgtcccttgactcttttacagactttgttgat
agtgtcagctttactaaactatgcagccaagaagatgacctcaaagtgaaattgaagaac
aacataatgtctgttttgagtaagttatcaaataatggcattgtcaaccgcatctttgac
caggaaccacttaatatgaagtcgaaactgtgggaatttgtgaatgtgcagttagacttc
ttattcaaggaaattcagactgctctgagaagtgtttgcaaatcctcaaatggaaaccag
tctgcaggagctgaaaaaagggacttgagtctctccaagcagccagtgaagtcccccaag
cagccagtgaagtcccccaagcagccagtgaagtcccccaagcagccagtgaagtccccc
aagcagccagcgaagtcccccaagcagccagcgaagtcccccaagcagccagtgaagtcc
cccaagcagccagtgaagtcccccaagcagccagtgatgtcatcggtgtccacagcctct
aaacttaaaagaccgcagggagcggtacaaaaaactagttgtgtgtccagaacatcggca
agtaaaagaccgcgagaggaattaacagagtgtgttgaacccaacataaaaagaaccagg
gctcagactctccccccttgcaaaaccggtcttggaagaggcaaaaatattaaaatgtca
tttgaagaagacaaggaatcagagcctcaaacctcagatcatcctcttatgcaacctcct
ttgcaacacgggttagagatctcatcatcaaacagccctttgtctgctgagaaaacagct
gcctatgttcgccggctgtctcaaaatggctcactccatgacaagtctgacttcgaaatc
ctcacagaacagcaagcctcaaacctaacattcaacctggtgacagactcccagatggga
gagatcttcaagtgtctgttacaagggtctgatctgctagaaactaatgtctcagctggg
gacaatcagggctggcctcttggtactcctcggaaaggagagcgcttccgaggcgttacc
accccaagcaaagtttgtaccacaaccaaagttggtactccctctaaagtcattgccaca
tggtcttctatttcaccttgcaagttttcctctctaaattcaaaagtccaaattccacta
aatccagctttgttggatgagagttgcatgttagaggtgccctccagcctaccagaagac
aaaatgacatcgcagtccagtgtgttctcgcagagatcttattccattttggcagaagat
ctggctgtctcactcacaattccttcgcctctcaagtctgacagtcacctcagcttcttg
cacccagccagcgtggagcccatgtctgctccagatagtgtcatcagtgcacatttcagt
gaggatgctcttatggatggggaagacgctacagagcaggacattcaccttgctctggac
acagacaactccagcggtgcgtcaagcggtggtggcaggactagggaggctcctgttaac
cccctgtttcacttcaagcctcacttgcccatgcaggcagtagtgatggagaagtcaaat
gatcatttcattgtgaggatacggcatgcaaacactagcccagacatcaactccaacaac
tcaggtgtcaacttcaccaacctaggcatcaactgcaccaacccaggcatcaacttctcc
aacctaggcaacaactccaccagcctagtggtcaaccccacatgcctaggaattaaatca
acaagccaaggagtcaactcttcaagcccaggaagtgtaaactctacctacccaggaaat
aactccaccaacaaagacacaaactcaagctacccatgtgtcaactccacaagcccacaa
gccaactgcaccaacccaggcatctaccccataagtgcagacatcaatccaagggctgtc
tcaagccctcaaacaccaccaggagaagaacaacatggcaaagaccaaggaaaaactcct
tctaaaacccatttttcgaaggccagtcctcctttctacctttccacaagcaccgaaaca
gcatctgcgctatcttcaccatgcctcaccatcatagaagacacaccggagagggaccac
agcaagggtaagacggggaaaaagcggacaaggcaccacgtcgaaatgaaagcaaagcgg
cctaaaaaggaggtgatctctgagaagatcaagcataaaaagaagtcctcaaaaagggcc
aaaggaaaggagactagaagctccaagagcgagagaagtaaagtcactactccaccccaa
tctaccccatcacccaacagcctgtctgccaagaatatcatcataagaaagggggcagtg
gtggtgacttggacaagggatgaagaccgagatattctcctcgcgctgaagatgaaaggt
gcctctccagatactttctcttccctatcggagaagatgaacaagacacccgctcagatt
gcagagagattttcccagctgatgaagctttttaagaagaagaagatgatgtcgtaa
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integrated database retrieval system
