Oncorhynchus masou masou (cherry salmon): 135557530
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Entry
135557530 CDS
T10723
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135557530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135557530
03036 Chromosome and associated proteins [BR:
omm03036
]
135557530
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135557530
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135557530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WDR55
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_DCAF4
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
MIOS_WD40
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
135557530
NCBI-ProteinID:
XP_064846930
LinkDB
All DBs
Position
16:complement(15005482..15010921)
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AA seq
372 aa
AA seq
DB search
MEGINAKYVSKKISKTRWRPVSSSSLQQPDIFATGSWDNEDNSISIWSIGENGVSSMDDE
FEGDPQLLCEYKHNGDVLDLQFLDQDRIVTASSTGAVTIFRHHHNSQTLSVSQLWERAHH
YPCDNAPCTGVVCNSPEIVTVGEDGRIMLFRADQEGVLRTIEKADSSAIHAVTFLRTTEI
LTVNSIGQLKLWDFRQPGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIWD
VRQGNMPISLMEAHTSELWEVHFHPSNPGHLFSCSEDGSLLHWETSSYTDTPSFLQGGRN
TSIISRSAIAPAGGNQSLINAWLTGDSSKGHLETTHMLPSQMLSVNSLDVLGQCLVCGTD
REAIYVNRHVPM
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatcaatgctaagtacgtgtcaaagaaaatcagcaaaacgagatggagaccg
gtctcatcttcgtctttacagcaaccagacatatttgctactgggtcttgggacaacgag
gacaacagcatttcaatttggtccatcggagagaatggggtctccagtatggacgatgaa
tttgagggagaccctcaattattatgtgaatacaaacataatggggatgttctggacctt
caatttctggatcaagacagaatagtaacagcgtcatcaactggagcggtgactatcttt
cggcatcaccacaacagccagacattgtctgtttctcaactgtgggaaagagcacatcat
tatccctgcgacaacgccccatgtactggagttgtgtgtaacagccctgagattgtcacg
gttggggaagatggaaggatcatgctcttcagagcggaccaggaaggagtgctgcgcacc
atagaaaaggctgacagtagcgcaatccatgctgtgactttcctgaggactacagagatc
cttactgtcaattctattggccagctcaaactatgggacttcaggcaaccaggcaatgaa
ccatcgcagattctttcattaactggagacagagtcccactgcattgtgtggacaggcac
cccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgggac
gtgagacaaggcaacatgcccatttcacttatggaggcacacacttctgaattgtgggag
gtccattttcatccatcaaacccaggccacctgttctcatgctcagaggatggatcactg
ttgcattgggagacttcttcatatacagacacaccatccttcttacaaggtggacggaac
acaagcataatttctcgcagcgcaatagccccagcaggtgggaaccagtccctcatcaat
gcctggctcactggggactctagtaagggacaccttgagaccactcacatgctgcctagc
caaatgctgtctgtgaacagtctggatgtactgggacaatgcttggtgtgtggaacggac
agagaggctatttatgtcaacagacatgtcccaatgtaa
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integrated database retrieval system
