Oncorhynchus masou masou (cherry salmon): 135557576
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Entry
135557576 CDS
T10723
Name
(RefSeq) afadin-like isoform X1
KO
K05702
afadin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04520
Adherens junction
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135557576
04530 Tight junction
135557576
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
RA_3
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
135557576
NCBI-ProteinID:
XP_064847046
LinkDB
All DBs
Position
16:complement(17772799..17900362)
Genome browser
AA seq
1937 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIIPKKIQSNGPEREKEGVIQNFKRTLSKKEKKKEKKREKEAHIPDGD
EQALNREDGENSRLAAEVYKDMPENSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRP
DSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCIARHTDDK
SGKEIVLDDTECPLQIFRDWPNDRGALVFQLKKRPPDYVPKKGRKPEDKGLRGKGMDGPL
YGSLPPEKLPYLVELSPGRGNHYGYYTYQHLEDGSDSRDKPKLYRLQHSVTELGSDTTDD
GSIQLFGPGILPHHCKLMHTEGLVTVTPHSLEAETYVDGQRVTETTVLRSGATLQFGASH
VFKFVDPSYDHSMGKGGPGPMMRGRHKSGSVSETTFDLQGDIHSGTALPASKSSGKLDME
RSANCSERGMVKPMIRGEQQDGRSQDILSPELTLPASIEFRDNSEDAFLSAIINYTNSST
VHFKLSPTYVLYMTCRYVMSSHYRPDVSPSERTHKVIAIVNKMVSMMEGVIQEIPEGAQK
QKNIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVQCLQSDLNN
YMPAFLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFN
KLAMEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSM
QDVQNIHNTCFKLNSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGRE
VQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPRSPGTWTIH
FEGADCDSHFFADNSDLQMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVK
GGAAEVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATL
LNQPSPMMPRALQGGRDKNGKLRPKSEGFELYNNSVQNGSPESPQGDWQAYPEPKKLSGE
ERLLKNRADHRSSPNVANQSQSPGGNTVYPGGPGTKITSVSTGNLCADDEPSPPRPEAYP
IPTQTYPREYFTIPASKSTDRMGPAAGQLYTDDRGPPGSMEDHHNSSIAIQRMGHSQEEL
CDLPGGYPPAPLRPEDLVHLQQQQREADYQRGSGEHWVNHHQVSSSVESSTSSQEHLNYS
SNKTQSNHKSGPGRWKTPGPIAPHPGPVAQATRTDLPPPPPPPVHYQDFDSQPDLPLPPP
PSASQQQAAAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQVRNPSMPVAHNNN
QHGGTLPPPTQHYQMPPPQSPMPMQQVPLPYFPPQGQQQAQQQQPPRPEKLSTLPRATTL
PPQGNPMDTVIRELLPQQQPRTIERRDLQYITISKAALSSSDSLSPDPWKRDAREKLEKQ
QQLHIVDLLDREIQDLQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEEDEEDDDED
VDSMMIMQRLEAEKRARLQDEERRRKQQLEEIRKREAEDRAKQEEERRWREEERARREVD
EKRRQEEEYYTRLEEGRRRQHEEAERKLLTPDEPGLYRPPLPRDYQPQPPPPTASPATTA
TNAPPPPPQRNASYLKTQVVSPDALYTAKFVSYNDEEEEDAAGQVKLSATRKSYGDLPPA
HKPQPPARKPRPLSDGIFLSSSFQLPAVNANSTAGQPPPPPPPIKPSLSFIPTGNSKGFH
SYTGNTTGVVGSEEGYKDLREKWTKGGQEQENTLTGEAPESMTFKERQRLFSQGKEVSNK
VKASRKLMELENELNTK
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagcggcggaaactagctgacatcattaaccactggaac
gccaaccggctcgacctgttcgagatcagccaacccacagaggacttggagttccacggc
gtgatgcgtttctacttccaggaccgcgtggcggggaactttgccaccaagtgcatccgc
gtgtcctccacggccaccactcaggacgtcatcgagacgctggccgagaagttccggccc
gacatgagaatgctctcctcgccaaaatactccctctacgaggtccacgtcagcggggaa
gaacggaagctggacctggatgagaagccactggtggtgcagctcaactggaacaaagac
gaccgcgagggacgcttcgtcctcaagaacgagaacgacatcatccccaagaagatacag
agcaacggcccggagagggagaaggagggagtaatccagaacttcaaacggacactgtcc
aagaaagagaagaagaaggagaagaagagagagaaggaggctcacattccggatggagat
gagcaagcactgaacagagaagatggagagaactccagactggcggcggaggtgtacaag
gacatgccggagaacagcttcaccaggaccatctctaaccctgaggtggtgatgaagagg
aggaggcagcagaaactggagaagaggatgcaggagttccgcagcagcgacggcaggccc
gactctgggggaacgttgaggatctatgcagacagtctgaagcccaacattccttataag
accatcctgctgtccacgacagacatggcagactttgctgtggtggaggccctggagaag
tacggcctggagaaggagaacccccgggagtactgcatcgccaggcacacagatgacaag
tctgggaaggagatcgtcctggacgatacggagtgtcctcttcagatcttcagagactgg
cccaacgaccgaggagccctcgtgttccagctgaagaagagacctccagactacgtgcct
aagaagggccggaaaccagaggacaagggcctcagagggaagggcatggacgggcccctg
tacggctctctacccccagagaaactgccttacctggtggagctcagcccagggagggga
aatcactatggctactacacgtatcagcacctggaagacggctccgactccagggacaaa
ccaaagctctaccgtctgcagcacagtgtcactgagttgggctcagacacgacagacgat
ggctccatccagctgtttggtccaggtatcctgccccaccactgcaaactgatgcacaca
gagggtctggtgacagtgacgccacacagtctggaggctgagacctacgtggacggccag
cgtgtcaccgagaccactgtgctgcgaagcggagccacacttcagttcggcgcctcccac
gtcttcaagtttgtggaccctagctacgaccacagcatgggcaagggaggtcccggaccg
atgatgagaggaaggcacaagtcagggagtgtttctgaaacgacctttgacctgcaaggg
gacattcacagtgggacggccctccccgccagcaagagctcaggtaagctggatatggag
cgttcagccaactgcagcgagaggggcatggtcaaacccatgatccgcggggagcagcag
gacggcaggtcccaggacatcctgagcccagaactgacgctgccggccagcatcgagttc
agggacaactccgaagatgcctttctgtcggctatcatcaactacaccaacagctccacg
gtgcatttcaagctgtcccccacctacgtactgtatatgacctgtcgctacgtcatgtcc
agccactaccggcccgacgtcagtccctcggaacgcactcacaaggtcatagccatcgtt
aacaagatggtgagcatgatggaaggagtcatccaggagattcctgaaggggcccagaag
cagaagaacattgcgggggccctggccttctggatggccaatgcctcagagctgctcaac
ttcatcaaacaggacaaggacctgtcgcgcatcacactggacgcccaggacgtgctggca
cacctcgtccagatggccttcaagtacctggtccagtgtctgcagtctgacctgaataat
tacatgcctgcgtttttggatgacccagaggaacagaaccctcagaggcccaaaatagag
gacgttttgcacaccctgacgggcgccatgtcgctgctgcgccgttgccgtgtcaacgcg
gcgctgaccatccagctgttctcgcagctcttccacttcatcaacatgtggctgttcaac
aagctggcgatggaggccgactctgggctgtgttcacactactggggcgccatcctccgc
cagcagctcagccatatcgaggcctgggcagagaaacagggcctggagctggccgccgac
tgccacctcagtcgcatcgtacaggctacgactctcctcaccatggacaagtactccatg
caggacgtgcagaacatccacaacacctgcttcaagctgaactccctgcagctcaacgcc
ctcatgaccaactaccactgtgctcccgacgagccttacatcccccctgagctgatagac
cacgtggttgccgtggcggagaacacagcagatgagctggcccgtagcgacggccgagag
gtccagctggaggaggaccccgacctgcagctgcccttcctgctgcccgaggacggctac
tcctgcgacgtcgtgaggaacattcccaacggattccaggagttcctggaccccctttgt
cagagaggattctgtcggctaacccctcacccccgctcccctgggacctggaccatccac
tttgaaggagccgactgcgacagccacttctttgcagacaactccgacctgcaaatgcgg
aaggaaccggaagttgtgacggtcaccctgaagaagcacaatggcatgggcctcagcatt
gtggctgccaagggtgctggacaggacaagctcgggatctacatcaagtctgttgtgaag
ggaggtgcagctgaagtggacggtcgtctggctgcaggggaccagctgctaagtgtggac
ggccgcagcctggtgggcctctcccaggagagggctgcagagttgatgacgaggacaggc
tctgtggtgacactggaagtggccaaacagggtgctatttaccacggcctggccacactc
ctcaaccagccttctcctatgatgcccagagcgttacaaggagggcgtgataagaatggt
aaactgagaccaaagagtgaaggctttgaactgtacaacaactcagtccagaacggctct
ccagagagcccccagggtgactggcaggcctacccagaaccaaagaagttgagcggggag
gagagactactgaagaaccgggccgaccaccgctccagccccaacgtggccaaccagagt
cagagtccaggaggaaataccgtctacccaggaggacctgggacaaagatcacctccgtc
tccacgggcaacctgtgtgctgatgacgagccctctccacctcgtcccgaggcctaccca
atccccactcagacctaccccagggaatacttcaccatcccagcctccaagtctacagac
aggatgggcccggccgcggggcagttatacactgacgacaggggccctcctggctccatg
gaagaccaccacaacagcagcatcgccatacagcggatgggccactctcaggaggagctg
tgtgacctcccagggggctaccctccagcccccctgcgtcctgaggacctggtccacctg
cagcagcagcagagagaggctgactaccagcggggcagtggggaacactgggtcaaccac
caccaggtctcctcctccgtggagtcctccacttccagccaggagcacctcaactactcc
tccaacaagacccagagcaaccacaagagtggcccaggacgctggaagacccctggcccc
atcgccccgcacccaggccccgtggctcaggccacacgcacagacctcccaccccctcca
ccgccccctgtacactaccaggactttgattcccagcccgacctgcccctacccccccct
ccctcggcctcccagcagcaggcagcagccgccgaccgcaagaagcgcgaggagcagcag
cgctggtatgagaaagagaaggcccggttagaggaggagagggagaggaagaggagggaa
caggagaggaagctgggacaggtccgtaacccatccatgcctgtagcccacaacaacaac
caacatgggggcacactcccccctcccacacagcactatcagatgccccctccccagtcc
cccatgccaatgcagcaggtgcccttgccctacttccccccccagggccaacaacaggcc
cagcagcagcagccccccaggcctgagaaactgtccactctgcccagagcgacgaccctg
ccccctcagggaaacccaatggacacagtgatcagagagctgctcccccagcagcagccc
cgcaccatcgagcgccgggacctgcagtatatcaccatcagcaaggcggcgctgtcctcc
agcgacagcctgtccccagacccctggaagagggacgcccgggagaagctggagaagcag
cagcagctgcacatcgtagacctgctggacagggagatccaggacctgcaggccaagccg
gagcgtacggccgaggagagcgaccggctcaggaagttgatgctggagtggcagttccag
aagagactgcaggagtccaagcagagtgatgaggaagatgaggaggatgacgacgaggac
gtggactccatgatgatcatgcagcggctggaggcggagaagagagcaaggttgcaggat
gaggagcggcggcggaagcagcagctggaggagatccgtaagcgcgaggcggaggaccgg
gccaagcaggaggaggagagacgctggagagaggaggagagggccagacgagaggtcgat
gagaagaggaggcaggaggaggagtactacacacgtctggaggaagggcggcgccggcag
cacgaggaggccgagcgcaagctgctgacgcctgacgagcctggtctgtacagacctccc
ctccccagggactaccagcctcagcccccccctcccactgcatcccccgcaaccactgcc
actaacgctccaccacccccgcctcagagaaacgcatcctacctcaaaacccaggtcgtc
tcccctgacgccttgtacactgccaagtttgtctcgtataatgacgaggaggaggaggac
gctgcaggtcaggttaagctctccgccaccagaaagtcctatggtgacctcccgcccgcg
cacaagccgcagccgcctgcgcgcaagccccgccctctgtctgatgggatctttctgtcc
agctcattccagctgccggctgtcaatgccaacagtactgcagggcagccccctccccct
ccccctcccatcaaacccagcctcagcttcatcccgacaggcaactctaaaggatttcat
tcatacactggaaacacaaccggggttgtaggatcagaagaaggttacaaggacctgcga
gagaagtggacaaaaggtggtcaagaacaggagaacactttaactggagaagcgccagag
agtatgaccttcaaggagcgccagcggctcttttctcaagggaaggaggtgtccaacaaa
gtcaaggcctcacggaaactcatggagctggaaaatgaactcaatacaaagtag
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integrated database retrieval system
