Oncorhynchus masou masou (cherry salmon): 135557625
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Entry
135557625 CDS
T10723
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135557625 (gtf3c2)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
135557625 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_TEP1_C
HC2
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
135557625
NCBI-ProteinID:
XP_064847153
LinkDB
All DBs
Position
16:19949071..19968091
Genome browser
AA seq
1094 aa
AA seq
DB search
MPVTESCTVRLLKLPLTKKSYSVNLSRLSVIKKRCSVRLSRLLVTDNWCSVKLCRLPVTK
RFSVKLCRLPVTKRFSVKLSILPVAQKRCSVRLSRLLMATIAQKLGKQGSESMGLPHGEE
TEQQTDPHEKEKPQAEAQTNPHEKPQDTNGEAVGVSSEQGQDVPPEELPVPSSTPGNRLQ
RKRVPNPKYQREPDTTNLQCPDSTKKPRKKMGLKISVVSNTETDQQEPDKKTPKPPKKTP
AKKTPQKKAPQKKPVVSRIDSDKGLIKQTPAKKTSTKKIQKETPQVNSTPAPAVPVLRET
PEEPETTPSGRPKRRAAKAALQYLHTLAKEVYNQPDNGTKNDWESSPVPSPSSTQPQKRT
SGKGKKRKAPDFDSDNAAEDVDFVPENQDTEEESEAEDTQEDLDLEKRQTPLKDLRSRRI
SRGLSSQVRYHGNSPNGLSNNMMGPIWMCTKTTKTFRDEHCNEWVFAEWMPSEKDWHCLS
DSEAEKYLPQEMMSTAFTFSREGIREETPLHRMKRFECLPPHPERWDMLFYTGGPVWAMD
WCPSPDGAPASQYAAIYCHRNLDDQHRMNELYTKPGLIQIWDLGQLQYNTSPQSSPRLAY
GIAQDKGFVWNLKWCPGGAWELPTTNRKAPHMPRLGLLAASTSDGHITIYSLPHPDTLMA
RRKHTAKGGACPTLMICQVQGVITLKRGSFKTNHDEKNNQVLSMDWLPVKPHNILAAGFY
DGTVALWNLSSKSILQRVRAPDRSFTLYPYHCFIAHDNATRALSFCHASSSAVFPVLPPA
VLSSPYPLLSSPLSSLSSALPPPRDLMVTAGDDRLVKMWDLRRTWEPCQSFKRFLSTEAA
WPLHWAGVFISQESTYATFGQHGLNYFDSGYLGFKPLFLVPRKGTMWSLSISDWLNTAVT
ADSVGDVIMVLIPNLFNNPCYLKRTIDRRFPVFRTEMVQLKEEVEENEGGVGEEGSGSTS
NGTSHHTPQTYRETAQKYYLHYHDMDMRTFKNAQSRAPWKHMQVAETKGGPCLDLMPLAS
LTKVRFNPNLCAQSWVLSGGQAGLVRAHCLRAMNSSHINKMVQESQAQFSTMFPQDTTDS
QGDASAVRHTTEKL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacagagagttgcacagttaggctgttgaagctgcctctcaccaagaagagt
tactcggtaaacttgtctaggctttctgtgataaagaagaggtgctcagtaaggctgtca
aggcttcttgtgacagataattggtgctccgtaaagttgtgtaggctacctgtgacaaag
aggttctccgtaaagttgtgtaggctacctgtgacaaagaggttctccgtaaagttatct
attctgcctgtggcacaaaagcgttgctcagtaaggttgtctaggctgttgatggcaacc
attgcccagaagttgggcaaacagggtagcgaatccatgggcttaccccatggagaggag
acagagcagcagactgatccacacgaaaaagaaaaacctcaggcagaggcgcagaccaat
ccacatgaaaaaccacaggacaccaatggggaggctgtcggtgtttcatctgaacaaggc
caggatgtgcctccagaagagcttcctgtaccatcttccaccccgggaaatcgtctacag
agaaaaagagtccctaatccgaaatatcagagagaaccagacacgaccaacctacaatgt
cctgactcaacaaaaaagccaaggaaaaagatgggcctgaaaatatccgtagtctctaac
acagaaactgaccagcaggagcctgacaaaaagaccccaaaaccccccaaaaagacacct
gccaaaaagacaccacagaaaaaggcaccacagaaaaagccagtggtctcgagaatagac
agtgacaaggggcttatcaaacagacccctgccaagaagacctctaccaagaagatacaa
aaggaaacaccacaggtcaactccacgcccgcccctgcagtcccggtactgagggagacc
ccagaggagcctgaaaccacccctagtggcagacccaagcggagggcagcaaaagctgca
ttgcagtacctccataccctggccaaggaggtctacaaccaacctgacaatggtactaag
aacgactgggagtctagcccagtccccagccccagctcaacccagccccagaaacgaacc
agtggcaagggcaagaagaggaaggcccctgattttgacagtgacaacgccgcagaggat
gtggactttgttccagaaaatcaagacactgaggaggaaagtgaggctgaagatactcaa
gaagacttagacttggagaagaggcagacaccactgaaagaccttagatccaggcgcatt
tccagaggcctttcaagtcaagttcgataccatggtaattcccccaatggactgtccaac
aacatgatgggacccatctggatgtgcaccaaaaccaccaagaccttccgtgatgaacac
tgtaacgaatgggtctttgctgagtggatgccttcagagaaggattggcattgcttgtcg
gacagtgaggctgagaagtatctaccacaggagatgatgtcaacagccttcaccttctca
agagagggcatcagggaggagactcctctgcacagaatgaagaggtttgagtgcctgcca
ccccaccctgagcgctgggacatgctattctatacgggcgggccggtgtgggccatggac
tggtgcccctcccccgatggcgcccctgccagccagtacgctgccatctactgccacagg
aacctggacgaccaacacaggatgaacgagttgtacaccaaacctggactcatccagatt
tgggacctgggacaactccagtacaacaccagtccccagtcctctccacggctggcctat
ggtattgcccaggataaaggctttgtgtggaacctgaagtggtgtccaggaggagcctgg
gagctgcccaccactaacaggaaggcccctcatatgcccagactgggtctcctggctgct
tccacatcagatggtcacatcactatctacagcctgcctcaccccgacacactaatggcc
cgcaggaaacacaccgctaaaggtggagcctgcccaacactgatgatctgccaggtacag
ggtgtgatcactctgaagcggggctccttcaagaccaaccacgatgaaaagaataaccag
gttctctccatggactggctgccggtcaaacctcacaatatcctggctgctggcttctat
gatggtacggtggccctgtggaacctgtccagtaagtctattctgcagcgggtgcgtgct
ccagaccgctccttcaccctctacccctaccactgcttcatcgcccacgacaacgccacc
cgcgccctcagtttctgccacgcatccagctccgctgtcttccctgtcctccctcctgct
gttctttcctctccttatcccctcctctcgtctcctctctcctccctctcctctgccctt
cctcctcctagagacctcatggtgacggcgggtgatgacaggctggtgaagatgtgggac
ctgaggaggacctgggagccctgccagtccttcaagcgcttcctctccaccgaggcggcc
tggcccctgcactgggctggggtcttcatctctcaggagagcacctacgccacgtttggc
caacatggactcaattactttgactcagggtatctgggcttcaagccactctttctggtg
ccacggaaagggaccatgtggagcctgtcgatctctgattggctgaacacagctgtgacg
gcggactcggtgggagacgtgatcatggtcctaatacccaacctgttcaacaacccctgc
tacctcaaacgaaccatcgatcgcagattcccggtgttcagaaccgaaatggtccaattg
aaagaagaagttgaggagaatgagggaggagttggagaggaaggaagtggttccaccagt
aacggaacatcccatcatacacctcagacctacagagagacagcccagaagtactacctc
cactaccacgacatggacatgagaacgtttaagaatgcccagagccgagctccgtggaag
cacatgcaggttgcagagaccaaagggggaccgtgcctggacctaatgcctttggcttca
ctaactaaggtccgtttcaaccccaacctgtgtgcccagagctgggtgttgtctgggggc
caggcgggcctggtaagagcccactgcctcagggccatgaacagctctcacattaacaag
atggtgcaggagagccaggcccagttcagcaccatgttcccccaggacacgacagacagc
cagggggacgccagtgccgtcagacacaccacagaaaagctgtag
DBGET
integrated database retrieval system
