Oncorhynchus masou masou (cherry salmon): 135557754
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Entry
135557754 CDS
T10723
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135557754
Membrane trafficking [BR:
omm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135557754
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
135557754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
KNTC1_N
Lgl_C
Beta-prop_VPS8
Beta-prop_Vps41
CFAP43_N
Beta-prop_WDR35_TULP_N
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
135557754
NCBI-ProteinID:
XP_064847396
LinkDB
All DBs
Position
16:25659650..25809832
Genome browser
AA seq
1101 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QRTVLLNLGTVELYGSNDPYQRQARSPRKARQPAGGNGLCDINEGSASEDRCKSPTSDPR
DSSFSRSRSSSVTSIDKEAREAITSFHFCETFARKGDSAITPCLYVGTSLGTVLAVALNL
PPAGEQRLLQPVIVLPSGTLARLKGSILRMAFLDNTGTFLPPAFETWYEPNAAGADSEER
DKARKRRPVSVSPSTSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADV
VQMNIGNCVACFCANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSP
TEIQRITYSQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQA
GKASRGLAQHIPGPQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASAD
SFGKHAHDMMLKCKDKKWYQF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggagcaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcagtcc
gagaattttcagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagcggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggagcagccgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagacgacagcgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcgctcaagttcaacagagag
aggatcacattcgtccacctgccattccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagctcatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccatttcagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacagtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagactttctcacactctgtgagacgccatactctaacgatttccaggaaccttat
gctgtagtggtccttctagaaaaggatttagttgtaatcgaccttgcacagaatggttac
cccatattcgagaacccctatccactgaccattcatgagtctccggttacctgctgtgag
tactttgctgactgccctgtggacctcatacctgcactttactctgttggctccagacag
aaacgacagggctacagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactgtacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggacaagcagaacacagagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtatgaggtgaatgacatggagtcccctccagaggggggagga
gggggggaccgtgacctgcccaccccaggagcagcctcacctagcccccagactaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcagtggtggactacctc
cagaggacagtgctgttgaacctggggacagtggagctgtatgggtctaatgatccctac
cagagacaggctcgctctccacgcaaggcccgccagcccgccggaggtaatggtctgtgt
gacatcaacgaaggttctgcctcggaggaccgctgcaaatcccccacttcagacccccgg
gacagctccttcagccgttcacgctcctcctccgtcacctccatcgacaaggaggcgcgc
gaggccatcacctccttccacttctgcgagacattcgcccggaagggggacagcgccatc
acaccatgcctatacgtgggaacctccctgggaacagtgctggctgtggccctcaacctg
ccccctgctggggaacaaaggctgctgcagcctgttatcgtcttacctagcggtaccctg
gcacgactgaagggcagtatcctgaggatggccttcctggacaacacaggaaccttcctc
ccccctgccttcgagacctggtatgagccaaacgctgcgggcgccgacagtgaggagcga
gacaaggcccgtaaacgccgcccggtctctgtgtcgccctccacctcccaggagctgcag
gagagccagtatgcggtggtgtgctctgagaaacaggctaaggtcatagcactgccctca
cagaactgcatcttcaaacacagcatcacagagacatcgttcgtcctgagggctgacgtg
gtccagatgaacatagggaactgtgtggcctgcttctgtgctaacggacacatcatgacc
ctcagtctgccggggctgagaccgttgctggatgtaaactacctgccattgacagacatg
cggatagcccggaccttctgctttaccaacctgggccaggccatgtacctcacctccccc
actgagatacagaggatcacatacagccaggagacctgtgagaacctgcaggagatgctg
ggagaactgttcacaccagtggaaaccccagaggctcccaaccgaggattcttcaagggc
ctttttggggggggagcaacttccctggacagagaggaactatttggtgagacgcaggcg
ggtaaggcgtcccgtggccttgcccagcacatcccaggtcctcagggcctggagggcatg
aagggggcagcctcgggcgttgtggccgacctggcgcgtgcccggatagcactggatgag
agagggcagaaactgggcgagctggacgagaggacggcggccatgttggccagcgccgac
tcctttggcaaacacgcccacgacatgatgctgaagtgcaaagacaagaagtggtaccag
ttctga
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