Oncorhynchus masou masou (cherry salmon): 135557818
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Entry
135557818 CDS
T10723
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135557818
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135557818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
HH_EMRA
HrpB1_HrpK
TPR_19
TPR_10
Focal_AT
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
135557818
NCBI-ProteinID:
XP_064847529
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All DBs
Position
16:30300310..30311974
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AA seq
814 aa
AA seq
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MEDTDEPMTGMLDTDSSESGDSPAMEGNGDGFLPDLPVLTHPAEWTMDQVPPDNLTTVIH
DTDSESDQSSPEVIKQHQDQQSDLGSVEQAVQHFQLASAKLFQEEDSDDQFCSPQVEQQN
QMEASSEEESKDGPNNQEDATESLMQGEKMSEAVEQQQDPAQAQPPMVAEDGSPANMELE
ESKEMTEQGEPVEVPAEEPAVPTEPLIPAEYEKLAKGCEENPEDFNGWVYLLQYVEQENH
LGVVRKAFDAFFLHYPYCYGYWKKFADTEKKHGNVQVAEEVYRRGVQAIPLSVDLWLHYM
SFIKDNADHEDPETPGRIRAAYEHAVLAAGTDFRSDRLWEAYINWEMEQEKLANVTAIYD
RILGIPTQLYSQHLQRFKEHVQNNNPKHFLSEEEFVQLRVELAKANVAAAANGEGEETTP
ADELPPGTEDLPDPAKRVTEIENMRHKVIESRQEVFNQNEQEVSKRWAFEEGIKRPYFHV
KALEKTQLSNWKEYLDYEIENGTPERVVVLFERCLIACALYEDFWTKYAKYIEGYSIDGV
RHVYKKACTVHLTKKPNIHLLWAAFEEQQGNIAEARRILKALEATVPALAMVRLRRVSLE
RRHGNLEEAEALLREAIAAGKNTSETSFYAVKLARQLLKVQRSLAKARKVLLDAIDKDQA
SAKLYLNLLELEYSGDVQQNEADILACFDRALSSPLPLDSRLTFSQRKVEFLQDFGSDIN
KLVTAYDEHQKLLKENESAKRKAENGSQETESKRQRTDEHSSSGHMMQGDVQGNNSAYNY
NWYQQQYNNWGQNSWGQYNQYSQQYNQYYPPPPT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgacgagcccatgacggggatgttggacacagacagctctgagagtggg
gactccccagccatggagggcaatggagatggcttcctcccagacctgcctgtcctcacg
caccctgctgaatggaccatggaccaggttccccctgacaacctcaccacagttatccac
gacactgactcagagtcagatcagtcatcaccggaggtaatcaagcagcaccaggaccag
cagtctgatctgggatcagttgaacaagcagtgcagcacttccagctagcgagtgccaag
ctcttccaagaggaggattcagatgatcagttttgttctccccaggtagaacaacagaac
caaatggaagcttcgtcagaagaagaaagcaaggatggaccgaacaaccaagaggatgcc
acagagtctctaatgcagggtgagaagatgtcagaggctgtagaacagcaacaagatcca
gcccaagcccagccgccaatggttgcggaagatggaagcccagctaacatggagctggaa
gaatccaaagagatgaccgagcagggggaacctgttgaggtaccagctgaggaaccagct
gtccccacagagcccctcatccctgctgaatatgagaagctggctaaagggtgtgaggag
aaccctgaagacttcaatggttgggtctacctactgcagtatgtggagcaagagaatcat
ctcggtgttgtgagaaaggcgtttgatgcgtttttcctgcactacccctactgctacggc
tactggaagaagtttgctgacactgagaagaagcatggcaatgtgcaggtggcagaggag
gtgtaccggcgaggtgtgcaggccatccccctcagtgtggatctgtggcttcactacatg
tccttcatcaaggacaacgctgaccatgaagacccagagacaccaggacgcattagagct
gcgtatgagcatgctgtgttggcagcagggacagacttccgctctgaccgtctatgggag
gcctacatcaactgggagatggagcaggagaaactggctaacgtcacggccatctacgac
cgcatcctgggcatccccacccagctctactcacagcacctccagaggttcaaagagcat
gtgcagaacaacaaccccaaacacttcctgtcagaggaggagtttgtccaactgagggtg
gagctagccaaagccaacgtagcagctgcagccaatggggaaggagaggaaacaacacct
gccgacgagctcccgccaggcaccgaagacctcccagatcctgcaaagagagtgacggag
attgagaacatgcgacacaaggtgatcgagtcacgccaggaggtgttcaaccaaaacgag
caggaggtcagcaaacgctgggccttcgaggaagggataaaacgcccctacttccatgtc
aaagccctggagaagacccagctcagcaattggaaggagtacctggactatgagattgaa
aacggcactccagaacgtgtggtcgttctgttcgaacgctgcctcatcgcctgtgctctt
tacgaggacttctggacaaagtatgcaaaatatatagaaggctacagcattgatggagta
agacatgtgtacaagaaggcgtgtaccgtccacctgaccaagaagcccaacattcacctg
ctgtgggctgcgtttgaggagcaacaggggaacatagcggaggcgcgccgtatcctgaag
gctctggaggctacggtaccagccctagctatggtgcgtctgcggcgggtcagcctggag
cggcgccacggcaacctggaggaggcggaggccctgctgagggaggcgattgcggcgggg
aagaacaccagtgagacgtcgttctatgccgtgaagctggcccggcagctgctgaaggtg
cagagaagcctcgccaaggcccgcaaggtgctgctggatgccattgacaaggaccaggcc
agtgctaaactgtatctgaacctgctggaattggagtacagtggggacgtgcagcagaac
gaagcggacatcttggcctgcttcgaccgtgccctgagcagcccgctacccctcgactcc
cgtctcaccttctctcagcgcaaggttgagttcctccaggactttggcagcgacatcaac
aagttagtgactgcgtacgatgaacaccagaagcttctgaaagaaaacgagtcggcaaag
aggaaagcagagaatggctcacaggaaaccgaatcgaagagacagcgtacagacgagcac
tcaagctcagggcacatgatgcagggagatgtgcagggtaacaactctgcctacaactac
aactggtaccagcaacagtacaacaactggggacagaactcctggggacagtacaaccag
tattcccagcagtataaccagtactacccccctccacccacataa
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