Oncorhynchus masou masou (cherry salmon): 135557943
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Entry
135557943 CDS
T10723
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135557943 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135557943 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135557943 (srsf5b)
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135557943 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
135557943
NCBI-ProteinID:
XP_064847739
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All DBs
Position
16:39850311..39856442
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AA seq
322 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGRFPDRYGRGSQDSRRTNQPSGPPADRN
PPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNA
LEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRNRSPSRSRTPRRSRSHSPKA
RSPKRDYKRSRSRSHSGSPAPRAAAPGSPPPRAKETSSSSSKRPSKPSKSASPHSPPPAQ
RAPSRSPSRSRGSRSPSTDSRH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgcatatttgtcggccggttgaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctcaagaggggctttggt
tttgtggagtttgatgatcctagggatgctgaggatgccgtttatgagttggacggcaag
gagctctgcaatgagagggtgaccattgagcatgctcgtgtgcgcctgcgtggtgggcga
ggacgtggtggtgacagagggggaggaggaggaggaggccgcttcccagatcgctatggc
cgtggctcccaggatagtcggaggacaaaccaaccaagtggaccaccggcagataggaac
cccccaccgatgcgtacggagaaccgtctcatcgtggagaacctgtcatctcgcgtcagc
tggcaggacctgaaggatttcatgagacaggctggggaagttacgtttgcagacgcccat
cgccccaagctcaacgaaggggtggttgagttcgcttcttacagcgacctgaaaaacgcc
cttgagaagctgtctggcaaggagatcaatggaaggaaaatcaagctgatcgaggcagct
aagaagaggggttccaggagtcgttcccgctctgagagctcttctcgctcccgttcccgc
aaccgctccccgtcccgctccaggacccctcgtcgttccaggtcccactcccccaaagcc
cgctcccccaagagggactacaaacgctctcgttctcgttcccacagcggctctccagcg
ccccgtgctgccgcccctggctccccacccccgagggccaaagagacctcttcctcctcc
tctaaacggccctctaagcccagcaagtctgcctccccccactcccctccccctgcacag
cgggcaccttccaggtctccttccaggtctcgtggctctcgctctccgtctacggacagc
cgccactga
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integrated database retrieval system
