Oncorhynchus masou masou (cherry salmon): 135558095
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Entry
135558095 CDS
T10723
Symbol
zgc:110269
Name
(RefSeq) LOW QUALITY PROTEIN: probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03030
DNA replication
omm03410
Base excision repair
omm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135558095 (zgc:110269)
03410 Base excision repair
135558095 (zgc:110269)
03450 Non-homologous end-joining
135558095 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omm03032
]
135558095 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
omm03400
]
135558095 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135558095 (zgc:110269)
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
135558095 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
135558095 (zgc:110269)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
135558095 (zgc:110269)
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135558095 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_3_exonuc
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
135558095
NCBI-ProteinID:
XP_064847915
LinkDB
All DBs
Position
17:complement(8766806..8772094)
Genome browser
AA seq
201 aa
AA seq
DB search
MTRTQLLALYLLRSNAPGAIAYKEICDYTGKVLSLDTGPCFQPMFPSSRPRHVTGMFFXT
LTILGHDIKPVFVLDGKPPEEKRAVFSGTLRITAETIATYLTKWHPHNEVIEYSLSKLLN
ILKITHEEFVDLCILLGCDYCDKIAGLGPKRALTLIQQHRTIENVVLNINRMNKTLQPFL
LQNRPVPLFWQYQEHHPDRAP
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggacacagttgttagctttatatttgttgcgtagcaacgcacctggtgccatt
gcttacaaagagatctgcgattacacgggaaaggtcctttcgttggacaccgggccctgt
ttccaacccatgttcccatcttctcgtcctcgtcacgtgacaggcatgttcttttgaacg
ctaaccatcttggggcatgacatcaagccagtgtttgtgttggatgggaagcctccagag
gagaaaagggctgtgtttagtggcactcttagaattacagccgaaaccatagctacctac
ctcacaaaatggcaccctcacaatgaagtaattgaatactctctatccaagctgctaaac
attctgaagattacacatgaagagtttgtggacttgtgtatattgttaggctgtgactac
tgcgataagattgcaggccttggccccaagagagcgctgactctgatccagcagcaccgg
actatagagaacgtagtgctgaacatcaacagaatgaataagactctccaacccttcctc
ctccagaaccgccctgtaccactgttctggcagtaccaggaacaccaccctgaccgagcc
ccctga
DBGET
integrated database retrieval system
