Oncorhynchus masou masou (cherry salmon): 135558154
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Entry
135558154 CDS
T10723
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135558154
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135558154
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135558154
NCBI-ProteinID:
XP_064847961
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All DBs
Position
17:12016464..12018518
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AA seq
244 aa
AA seq
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MLMRISPCAIEMAKPLDHIKRPMNAFMVWSRGQRRKMSLENPKMHNSEISKRLGAEWKLL
SESEKRPYIDEAKRLRAQHMKDHPNYKYRPRRKPKSLLKKDRFLFPFPFLGDAEHLKGFS
TESILASAEKARALLPPTSSPYSLLDSGQFSTGAVQRISEIPHALAANGLSYASSLGYQT
GAFGSLGCPSQHTHTHPSSTNPGYALPCNCGTWSATGLQPQVAYILFPGMAGIDPYSCSP
HSSV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcgcatttcaccgtgcgctattgagatggcaaaacctttggatcacataaag
aggcccatgaacgctttcatggtgtggtctcgcggtcagagacgaaagatgtcactggag
aatcccaaaatgcacaactctgaaatcagcaaaagacttggcgcggaatggaagttgctt
tccgaatcagagaagcgaccatacattgatgaagccaagagattgcgcgcgcaacacatg
aaagatcaccccaactacaagtacagacctcggcgcaaacccaagagcttgctaaagaag
gaccggttccttttcccctttcccttcctcggggacgcagaacatttgaaaggattttcc
acggagtccattttggcttccgctgagaaagctcgagcccttttgccgccgacatcatca
ccatactcgctccttgactcaggtcaattcagcaccggtgctgtccagaggatctcagaa
attccccacgctctggctgccaacggcttgtcctatgcgtcctctttgggataccagact
ggcgcgtttggaagtttgggatgccccagccagcacactcatactcacccgtcctccacg
aacccggggtacgccttgccctgtaactgtggcacttggtcggcgacgggtttacagcct
caggttgcatacatcctgtttccaggtatggccggcatagacccgtactcctgttcacca
cattcaagtgtgtga
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integrated database retrieval system
