Oncorhynchus masou masou (cherry salmon): 135558297
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Entry
135558297 CDS
T10723
Name
(RefSeq) vimentin A2-like
KO
K07606
vimentin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135558297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135558297
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135558297
04147 Exosome [BR:
omm04147
]
135558297
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
135558297
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
135558297
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135558297
Exosomal proteins of other cancer cells
135558297
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7801
DUF1664
TPR_MLP1_2
Myosin_tail_1
Phage_GP20
TolA_bind_tri
DUF4407
DUF7491
Laminin_II
Seryl_tRNA_N
Spidroin_N
Motif
Other DBs
NCBI-GeneID:
135558297
NCBI-ProteinID:
XP_064848091
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All DBs
Position
17:complement(746911..760945)
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AA seq
466 aa
AA seq
DB search
MTAARGPQSSYKKYFGGERNMSHSSSYPSSRQLYSNPVTVRSSRVSFGLSSAAPGVYATR
TQRLRSSAPMPRLSSETLNFSLSDAVNSEFKTNRTNEKAQMQSLNDRFASYIEKVRFLEQ
QNKILQAELEQLRGKGTSRSRIGDLYEDEMRELRRQVDQLTNEKARVEVHRDNLSDDIDR
LREKLQEEMMQREESESTMQSFRGDVDNAALSRLDLERKVESLQEEINFLKKLHDEELLE
LQSQVQVSQQVQMDIDVVKPDLTGALRDVRSQYENLASKNMQESDDWYKSKFADLTDSAA
RNNESLRIAKQEANDYRRQVQALTCEIDALKGSNESMERQMREMEENFSMESSGYQDNVS
GLEEDIRNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITSPLPNFSSLNL
RETMMDSRPMVETTMSKKVLIKTIETRDGQVINESMNHDDPIDVFN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagcccgtggtcctcagtcctcctataagaagtattttggtggggaaaggaac
atgagccactcgtcctcctacccctccagccgccagctgtactccaacccggtgacggtg
cgctcctctcgggtctctttcggcctgtcctccgccgctccgggggtctacgcaaccagg
acccagcggctccgcagcagcgccccgatgccccggctgtcctccgaaaccctgaacttc
tctctgtccgacgccgtgaactccgagttcaagaccaaccggaccaacgagaaggctcag
atgcagtcgctcaacgaccgcttcgcgagctatatcgagaaggtccggttcctcgagcag
cagaataagatcctgcaggcagagctcgagcagctacgagggaagggcacgtcccgatcc
cgcatcggggacctgtacgaggacgagatgcgcgagctgcggcgacaggtggaccagctg
acgaacgagaaggcgcgagtggaagtgcaccgggacaacctgtctgatgatatagaccgg
ctcagagagaaactgcaggaggagatgatgcagcgtgaggaatctgagagtaccatgcag
agcttcagaggggatgtggacaacgcagctctgtctcgtctagacctggagaggaaggtg
gagtcgcttcaggaggagatcaacttcctgaagaaactacacgatgaggagctgttggag
ctgcagtctcaggtgcaggtgtcgcagcaggtgcagatggacattgatgtggtgaagcca
gacctgacgggtgctctcagggacgtccgctctcagtacgagaacctggcctccaagaac
atgcaggagtcagacgactggtacaagtctaagtttgctgacctgactgattctgcagcc
cgtaacaacgagtctctacggattgctaagcaggaggctaatgactacagacgccaggtg
caggcactcacctgtgagatcgatgccctgaagggaagcaatgagtctatggagcggcag
atgagggagatggaggagaacttcagtatggagtcgtctggttaccaggacaacgtcagt
ggtctggaggaggacattaggaacatgaaggatgagatggccagacacctcagagaatac
caagatctcctcaatgtcaagatggccctggacatagagatagctacctacaggaaacta
ctggagggagaggagagcagaatcacctctccattgccaaacttctcctccttaaacctc
agagaaaccatgatggattccagacccatggttgaaacaacaatgtccaaaaaggttctg
atcaagacgatcgagaccagagatggacaggtgatcaatgagtccatgaaccatgacgac
cccatcgatgtcttcaactag
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