Oncorhynchus masou masou (cherry salmon): 135558480
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Entry
135558480 CDS
T10723
Symbol
irf8
Name
(RefSeq) interferon regulatory factor 8 isoform X1
KO
K10155
interferon regulatory factor 8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135558480 (irf8)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135558480 (irf8)
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Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
135558480
NCBI-ProteinID:
XP_064848384
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Position
2:30851807..30859160
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AA seq
445 aa
AA seq
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MSVTPGGRRLKQWLVEQIQSGQYPGLVWEDDSRIMFRIPWKHAGKQDYNQEVDASIFKAW
AVFKGKFKEGEKAEPATWKTRLRCALNKSPDFEEVGDRSQLDISEPYKVYRIVPEEEQKT
GKSAAAALTSSPGDSTDMDCSSAHLEELIKEVKQSSSDEYLGIVKRSHSPQEDGCRMQPS
PEYWSQGSVSVFPGHQDPSPMGSFNAAFSQMIINFFYGGKLMDSVVTSHADGCRISPGQP
PLVQHRSPYGLPDSLQNVCFPPAELIEVERQRHVTRKLLGHLERGVLVRANREGIFIKRL
CQSRVFWSGLGGLSHHYSPGGPCKLERDDVVKIFDTGRFFQALQLYQEGQIPAPDPMVTL
CFGEELHDLSTAKTKLIIVQVIPVNCQQLLDAVSMRRSQYSSPNLEIQSDELHAGEQMAR
IYQDLCSYTAPQRVACYRDNMPITA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaccccgggcggtcggaggctgaaacagtggctcgttgagcagatccagagc
ggccagtacccggggctggtctgggaggacgacagccgcattatgttccgtatcccctgg
aaacatgctgggaagcaggattacaaccaggaggtagacgcttctatcttcaaggcctgg
gcggtgtttaaggggaagtttaaggagggggagaaggctgagcctgctacatggaagacc
aggctgcggtgtgccctcaataagagccccgacttcgaggaggtgggagacaggtcccag
ctggacatctctgagccctacaaggtgtaccgcattgtccccgaggaggagcagaagaca
ggtaaaagtgcagcagcagctttgacatctagccctggtgacagtactgacatggactgc
agctctgcacacctggaggagctcatcaaagaggtgaagcagtcttccagtgatgagtac
cttggcatcgtcaagaggagccactctccccaggaggatggctgtaggatgcagcccagt
ccagagtactggtcccagggcagtgtcagtgtcttcccggggcatcaagatccctcgccg
atgggttctttcaatgccgccttctcccagatgatcattaacttcttctatggtgggaag
ctgatggacagcgtggtgacatctcatgctgatggctgtcgtatctctccgggtcagcct
cccttggtccagcacaggtccccctacggtctcccagacagcctgcagaacgtctgtttc
ccccccgctgaactcatcgaggttgagcgccaacgccatgtcacccgcaagctcctgggc
cacctggagaggggtgtgctggtccgtgccaaccgcgagggcatcttcatcaagaggctg
tgccagagccgtgtgttctggagcgggctcgggggattgagccaccactacagccctggg
gggccctgcaaactggagagagatgatgtggtcaagatttttgacacaggaaggttcttc
caagctctccagctgtaccaggagggccagattcccgcccctgaccccatggtgaccctg
tgtttcggggaggagcttcatgacctcagcacagccaagaccaaacttatcatcgtccag
gtcattccagtgaactgccagcagctgttggatgcagtgagcatgcgtcgttcccagtac
agcagtcctaacctggagatccagtcagacgagctgcatgctggggagcagatggcccgg
atctaccaggacctgtgtagctacaccgcccctcagagggtagcctgctacagggacaac
atgcccatcaccgcctga
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