Oncorhynchus masou masou (cherry salmon): 135558485
Help
Entry
135558485 CDS
T10723
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135558485 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135558485 (gtf2b)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
135558485 (gtf2b)
Prokaryotic type
Archaeal type
TFB
135558485 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
135558485
NCBI-ProteinID:
XP_064848388
LinkDB
All DBs
Position
17:complement(12107281..12116833)
Genome browser
AA seq
318 aa
AA seq
DB search
MASTSRGDALALPKVQCPNHPDAMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KATQDPSRVGDAQNPLLNGGDLSTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgcggagatgccctggcccttcccaaggtgcagtgccccaaccac
ccagatgccatgctggtggaagactacagagcaggggacatgatctgccccgagtgtggc
cttgtagtgggtgacagagtgattgatgtgggttcagagtggaggaccttcaccaatgag
aaagccacccaagacccgtccagagtgggcgacgcccagaatccactcctcaacggggga
gacttgagcaccatgatcagcaagggaacaggcgcggcaagttttgacgagtttggcaac
tccaagtaccagaaccggcggaccatgagcagttcagaccgtgccatgctaaacgccttc
aaagagattaccaccatggctgaccggatcaacctaccaaggaacatcatagaccgaaca
aataacttatttaagcaagtgtacgaacaaaagagcctgaaggggcgggccaacgacgcc
atcgcatcagcctgcctctacatcgcctgcagacaagagggtgtgcctcggacatttaaa
gagatctgcgccgtgtcccgtatctccaagaaggagatcggccgctgcttcaagctgatc
ctcaaggccctggagaccagtgtggacctcatcaccactggagacttcatgtcccgattc
tgctccaacctaggcctgccgaagcaggtgcagatggcagccacctacatcgcccggaag
gctgtggagctggacctggtgcccggcaggagccccatttctgtggctgccgcggccatc
tacatggcctcccaggcctctgccgagaagaaaacccagaaagagattggagacatcgct
ggtgtggcggacgtcacaatcagacagtcgtacagactcatctacccccgcgctgccgac
ctctttcccccagacttcaaatttgacacccctgtggacaaactgccccagctgtga
DBGET
integrated database retrieval system
