Oncorhynchus masou masou (cherry salmon): 135558503
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Entry
135558503 CDS
T10723
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omm03032
]
135558503 (pif1)
03029 Mitochondrial biogenesis [BR:
omm03029
]
135558503 (pif1)
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135558503 (pif1)
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135558503 (pif1)
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
135558503 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
UvrD_C_2
AAA_22
DEAD
Herpes_Helicase
Mg_chelatase
RsgA_GTPase
AAA_7
AAA_16
ABC_tran
PhoH
AAA_5
Motif
Other DBs
NCBI-GeneID:
135558503
NCBI-ProteinID:
XP_064848416
LinkDB
All DBs
Position
17:complement(12543263..12554370)
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AA seq
647 aa
AA seq
DB search
MSPHIVTMMQGDDGAQLQCSVVVERLNSSGQATKRQVIRKAAVLLGRNEFQEIILRVHNG
KVPESYTLKEFQLFTRFAKDGKCTVKLLPENVQVLISDCPPHLLNIFLKTLSIKHQAWQT
SKPMTDREKLKACLPRSFETISPLQQKDVQKANELRSKVNAPVLSKGLVVRTGNKMTEGP
QGQQVKRQRTDCDSSPLKALHPSKKPTLSLPAARKLNKEQAAVLSAVLSGKNVFFTGSAG
TGKSFLLKRIVGSLPPKSTYATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRP
GVLQHWTSCRHLIIDEISMVEAQFFDKLEAIARCLRRSTEPFGGIHLIVCGDFLQLPPVS
KEKDKATFCFQSRSWRKCIHLNMELTEVRRQTDQSFISLLQAVRVGRVTEEVTAKLIKSA
YHKIERDGILATRLCTHKDDVELTNDNKLQQLPGSVRVFEAVDSDPALVKTIDSQSPVSR
LLELKVGAQVMLTKNLDVHRGLVNGARGVVVDFQPGKLGLPRVRFLCGTTEALKPERWMF
KAGGGLYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFERGQAYVALSRAKSLEGL
RVMDFDPHVVRADPDVLHFYSKLRKERLLLQASMNEFVGKSNQANRW
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcacattgttacaatgatgcaaggggacgacggtgcccagctccagtgcagt
gtcgtggtggagcgcctgaactcctctggccaggccaccaaacgccaagtcatccggaag
gcagctgttcttctcggtcgcaacgagttccaggagataatcctgcgcgtgcacaacggc
aaagtgcccgaaagttacacgctcaaagagttccagctttttacccggtttgctaaggat
ggcaagtgcaccgtcaaactgctccccgaaaacgtccaagtgctcatctctgactgcccg
ccccacctactaaacattttcctgaagaccttgagtatcaaacaccaggcctggcagact
agcaaacctatgacagaccgagagaagctgaaagcctgtctgccccgcagcttcgagacc
atcagcccattacagcagaaggatgtacagaaggccaatgagctgaggagcaaagtgaat
gcaccagtgctctctaaaggtctggtagtgaggactggtaataagatgactgaaggacca
cagggacagcaggttaagagacaaaggacggactgtgactctagcccattgaaggcactc
cacccaagcaaaaagcccaccctgtctctaccggcggcacggaagttgaacaaagaacaa
gccgctgtcctcagcgctgtgttgagtgggaagaatgttttcttcactggcagtgcaggc
acagggaagtccttcctgttgaagaggattgtgggctctctgccgcccaaaagcacttac
gccacggccagcacgggcgtggcggcgtgtcacatcggggggaccacgctacacaacttt
gctggtatcgggtcaggctcagcccctctggagcagtgtatagagctggcccagaggccc
ggggtcctgcagcactggactagctgtcgccacctcatcatcgacgagatctccatggtt
gaggcccagtttttcgacaagctggaggccatagccaggtgtctgaggaggtccacagag
ccgtttggaggaatccatctgatagtgtgtggagacttcctccagctgcccccggtctcc
aaggaaaaggacaaggccacgttctgcttccagtctagaagctggcggaagtgcatccat
ctgaacatggagctgactgaggtgcgcagacagactgaccagtctttcatctccctcctg
caggcagtgagggtgggcagagtcacagaggaagtcactgccaagttgataaagagcgcc
tatcacaagatcgagcgggatggtatcctggcaaccaggctttgcactcacaaggacgat
gtagagctcactaacgacaacaagctccagcagctgccagggtcagtgcgggtgtttgag
gctgtggacagtgaccctgcactggtgaagaccatagacagccagagtcccgtcagcagg
ctgctggagcttaaagtgggcgctcaggtcatgctaacaaagaacctcgatgtccatcgt
ggcctggtcaacggggctcgaggtgtcgtggtggactttcagccagggaaactagggctc
ccacgcgtgcgtttcctgtgcggcaccactgaggcgttgaagccagagcgttggatgttc
aaggccggaggcgggctttatctgagccgccagcagctgccactcaaactggcctgggcc
atctctatccacaagagccagggcatgacgctggactgtgtggagatctccctggcacgt
gtgtttgagaggggccaggcctatgtggcgctgtctcgggccaagagcctggaggggcta
agggtcatggactttgacccccatgtggtccgtgccgaccctgacgtgctgcacttctac
agcaagctgaggaaagagaggctactgttgcaggcttcaatgaatgagtttgtgggcaaa
agtaaccaggcgaatcgttggtga
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