Oncorhynchus masou masou (cherry salmon): 135558514
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Entry
135558514 CDS
T10723
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135558514
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
135558514
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
Med4
DUF6775
Motif
Other DBs
NCBI-GeneID:
135558514
NCBI-ProteinID:
XP_064848444
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All DBs
Position
17:complement(12927944..12971596)
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AA seq
961 aa
AA seq
DB search
MRHRYAGAVYQHQIPDEEQGSAQSRDPNPVSPVFSLPPPPPSFRERSTTTSHYQNHELPC
LSQPSRRGIHACQPQHSEPPPLTNYDIAQRPSHRVCEPDGQPAHLKQNLWAAVGSQPQSE
QPVSQSCHCSFSEKANLSHQRQPLTHPPQPSLSLPPPPTSSSLLFLQESNRGEHFQSSAN
YQQASIVEHCRGGEGGGGYRDQKQLLQQHCQRLRHRDPSPEAIRANSQKGRTVNVCESIE
ANRRAFESQAQDLQQLQQKPLLRAQQQLLVGSSLPINYCANGSGEVCRNNQASLLQQHQQ
QQDALGLCPQRPQHCDQDCNKPGQTNQANQSQQHCRDSRVNPPTQPYGGNSSATGSSSKS
SPNYGSSYHLWPESPHKGEERILIDHYQATTEQKKLSHAGSKPCLSESSGRLPQIAMNTC
KYNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPSKASNESLVR
DGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKES
SYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVC
AIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLFTDAS
SRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTSN
FLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEK
HVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQLRS
VKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEEKLDSVTGSLQAL
PCLISQAINQQQQEFLDGFLHRFRPTSLGSERSERSERSWTSTARRRRSPSTAPHTSSDS
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcaaggc
agcgcgcagagccgagacccaaacccagtctctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcaactaccacctcacactaccagaaccacgaactgccttgt
ctgagtcaaccctctcggagaggtatccatgcctgtcagccgcagcacagcgaaccccca
cctctgacaaactacgacatcgcccagcgaccgtcacaccgggtctgtgaacccgacggg
cagccagcgcacctgaagcagaacctttgggccgcagtcggctcgcagccgcagtcggaa
cagcctgttagtcagagctgccactgcagtttttccgagaaggcgaacctttctcaccag
cgccagcccctcactcacccgccgcagccctccctatctttgccgccgccgccaacgtcg
tcctctttgctgtttttgcaggaatctaatcgcggggaacattttcaaagcagtgccaat
taccaacaggcgagcatcgtggaacactgcaggggaggagaaggaggaggagggtaccga
gaccagaagcagttgttgcagcaacactgtcaaagactccgacacagggacccctcccct
gaagcaatccgagcaaactcgcagaaagggcgcacagtaaatgtatgtgagtcaatcgag
gctaatcggcgagcattcgagtcccaggctcaggacctgcagcagctacagcaaaagcca
ctattgcgagctcaacaacagctactggtggggagcagcttgcctatcaactactgcgcc
aacggctcaggagaggtatgtaggaataaccaggcatcactgctgcaacagcatcagcag
cagcaagacgcactggggctatgtccccagcgtccgcagcactgtgaccaagactgcaat
aagccggggcaaacgaaccaagccaatcagtcgcaacaacattgccgcgactcccgtgta
aatccaccaacgcagccgtacggggggaactcgtctgcgactggcagtagcagcaagagc
agccctaactacggctccagctatcacctgtggccggagagcccgcataagggagaagag
cggatactaatcgatcattatcaggcaaccactgagcagaagaagctgagccatgctgga
tccaagccctgcctctccgagagcagcggccgactccctcagatagccatgaacacctgc
aagtacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcgcggcgcaaccta
gcagagctcgactcggagacgcagcccctccagacgttgcacagctccggcctggaggtg
gtggtatcaaagggcaacggcgaggaccccagcaaggcgtccaacgagagcctggtcagg
gacggaaacggtgctcctgtgaagaagaacaaggacattggctataggctcggccaccgg
agggcgctctttgagaaacggaagagactcagtgactacgccctcatctttggaatgttc
gggatcgtcgtcatggtgactgagactgaactgtcctggggagtttacggcaaggaatct
tcgtactcatttgcactgaaatgccttatcagcctatccactgttatattgcttggtctt
ataataatgtaccatgcccgggaaatacagctgtttatggtggacaatggggcagacgac
tggaggatagccatgacgtacgagcgcatcttcttcatcgtgctggagctgctggtgtgc
gccatccaccccatcccgggccattaccgcttcacttggacagcacggatcgccttcacc
tacacgccgtcgacggccaacgccgacgtggacatcatcctctccattcccatgttcctc
aggctctacctgattggccgcgtcatgctgctgcacagcaagctcttcacagacgcctcg
tcgcgcagcatcggcgccctcaacaagatcaacttcaacacgcgcttcgtcatgaagacg
ctcatgaccatctgccccggcaccgtgctgctggtcttcagcatctcctcctggatcatc
gccgcctggacggtgcgagtctgcgagaggtatcatgacacacaggaagtgaccagtaac
ttcctgggagccatgtggctcatctctattaccttcctctccattggctacggagacatg
gtacctaacacgtactgtgggaaaggtgtatgtctgcttacagggatcatgggagctggc
tgcactgcactggtggtcgccgtggtagccaggaagttggagttgaccaaggctgagaag
catgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaacacagctgcc
aatgtactcagggaaacatggctcatctacaaacacactaagttggtcaagaagatcgat
cacgccaaggtgcggaaacaccagcgcaagtttctacaggccatccatcaactgcgcagt
gtgaagatggagcagaggaaactcaatgatcaggccaacacgctagtagacctggctaag
acccagaacgtgatgtatgacctggtgtcggagctgcaggagcgcagcgaggaactggac
aagcggatcggcatgctagaggaaaagctggactcggtgacgggcagcctacaggctctg
ccctgtctcatctcccaagccataaaccagcagcagcaggaattcctggacggcttcctg
caccgcttccggcccacctcactgggctcagagcgctccgaacgttccgagcgttcctgg
acctccaccgcccgccggcgtcgctcgccctcaacggcgccgcacacctcctctgacagc
ggttag
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