Oncorhynchus masou masou (cherry salmon): 135558544
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Entry
135558544 CDS
T10723
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135558544 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135558544 (copb2)
Membrane trafficking [BR:
omm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135558544 (copb2)
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
135558544 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
135558544
NCBI-ProteinID:
XP_064848489
LinkDB
All DBs
Position
17:14181692..14199596
Genome browser
AA seq
942 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRVEIQPKHIFWSDSGELVCIA
TEDSFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKESFVAEQFLRETCLGNSLPATNYPLITPNEERNILEEA
TGYEPKGAPLSLATPVLQAEDSGEETMPAAGVMASVLAAVVAAAVIPPSEAEPEVAPEEE
SPSSSESQKDKVLDELEDDLDNMELDDIDTSDVNLDEDFLDD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctggacatcaagcgtaagctgacagcccggtcagaccgtgtgaagagc
gtggacctccacccgaccgagccatggatgctggccagcctgtacaatggtagtgtctgt
gtctggaaccacgaaacacagaccttggtgaagaccttcgaagtgtgtgaccttccagtg
agagcatcgaagtttgtagccaggaagaactgggtcataaccggagcggatgacatgcag
atccgtgtgttcaactacaacaccctggagagggtccacatgtttgaggcccactctgac
tacatccgctgtatcgccgtgcatcccacccagccctacatcctcacaagcagtgacgac
atgctaatcaagctgtgggactgggagaagaagtggtcttgcagtcaggtgtttgagggc
cacacccactacgtcatgcagattgtcatcaaccctaaagacaacaaccagtttgccagt
gcttctctggacagaaccatcaaggtgtggcagctgggctcctcctctcctaacttcacc
cttgagggccatgagaaaggagtcaactgcattgactactacagcggaggggacaagcca
tacctcatatcaggtgctgatgaccgtctggtcaagatttgggactaccagaacaagacg
tgtgtgcagaccctggagggccacgcccagaatgtgtcgtgtgtcagctttcacccagag
ctgcctatcatcatcacaggctcagaggacggcactgtgcgtatctggcactcgagtaca
taccgtctggagagcacgctgaactacggcatggagcgcgtgtggtgtgtgtgtggcctg
agaggctccaacaatgtggcgctgggatatgacgaaggcagcatcatcatcaagctgggg
cgtgaggagccagccatgtccatggacaccagtgggaagatcatctgggccaagcactcg
gaggtgcagcaggcaaacctgaaggccatgggcgacacggagatcaaggatggagagagg
ctgccgctggccgtcaaagacatgggcagctgtgagatctacccccagaccatccagcac
aaccccaacggaaggtttgttgtggtgtgtggagacggagagtacatcatctacactgct
atggccctgaggaacaagagcttcggctcagcgcaggagtttgtctgggcacacgactcc
tccgagtatgccatcagggaaagcaacagtgtggtcaaaatcttcaagaacttcaaggag
aagaagtctttcaagccagactttggtgctgaaggtatctatggaggctttttgctaggc
gtcaggtcagtgaacggtctggccttctatgactgggaaaacacagagctgatccgccgc
gtcgagatccagcccaaacatatcttctggtcagactcaggggagttggtgtgtatagcc
acagaggattccttcttcatcctgcgctacctgtcagagaaagtagccgcctcccaagag
aacaacgagggagtgaccgaggatggcatcgaagacgcctttgaggtccagggggagatc
caggaggtggtgaagacaggcctatgggtgggagactgcttcatctacaccagctctgtc
aacagactcaactactttgtggggggagagattgtcaccatcgctcacctggacagaacc
atgtacctcctgggctacatccccaaggacgaccgcctgtacctgggtgacaaggagctg
aacatcgtcagctactccctactggtgtctgtgctggagtaccagacagctgtgatgcgc
cgggactttggcatggccgacaaagtgctgcccaccatccccaaggagcagaggacccgc
gtagcacacttcctggagaaacagggcttcaagcagcaggctctggccgtgtcatcagac
tcggagcacaggttcgagcttgccctgcagctgggggagctgaagatcgcctatcagctg
gctgtggaggcagagtcggagcagaagtggaagcagctggcagagctggccatcagtaag
tgccagtttagcctggcccaggagtgccttcatcacgcccaggactacggtggcctgctg
ctgctggccaccgcctcgggcaacgccgccatggtgggcaagctggccgagggcgccgaa
cgggatggcaagaacaacgtggcattcatgacctacttcctgcaggggaaattggaccac
tgtctcgagctgctgatccggaccaaccggctgcccgaggcggccttcctggcccgcacc
tacctacccagccaggtgtccagagtggtcaagctgtggagggagagcctggccaaggtc
aaccagaaggcggctgagtcactggccgacccgactgagtatgagaacctgttccccggg
ctgaaggagtcgttcgtggccgagcagttcctccgtgagacctgcctgggcaactccctg
cccgccaccaactaccctctcatcacgcccaatgaagaacgtaatatactagaggaggcc
acgggctacgagcccaaaggagctccactctccctcgctacaccggtactgcaggctgaa
gacagcggcgaggagaccatgccggccgcaggcgtgatggcatccgtgttggcggcggta
gtggctgcagccgtgatccctccctcggaggcagagcctgaggttgcacctgaggaggaa
agccccagctcatctgagtcacagaaggacaaggtcctggacgaacttgaagacgacctg
gacaacatggagctggacgacattgatacctcggacgtcaacctggacgaggacttcctg
gatgactga
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