Oncorhynchus masou masou (cherry salmon): 135558566
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Entry
135558566 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135558566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135558566
NCBI-ProteinID:
XP_064848522
LinkDB
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Position
17:14640549..14664406
Genome browser
AA seq
2546 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKAAQNKLEKFLTDQKNEIESLKTQHERFKADCEQQYFDVEKR
LAESQEQIVSHTRNYQTLKEENTKLIEELNNLKGVDVESSEEKESQQPSKAKYEIEAERR
ELARLLEKRTQDVENLTEDVKRLNDKLVETNTAKIDLQLKLDEIQSSEVSIQHREKRMEQ
EKELLQNQNTWLNSELKTKTEELLSVSRDKGKEILELKCSFECKKDEVTRLQTQVTNLKK
SSENLQKRVEDLMTKLKEAKDHYSTMEEKYRNEQNAHIKLSNLYKGSASDAESKNEELNR
AVEELHKLVKEAGDARQNMEKKLADMEGSKSKQEAELKEKFKKMELENANLRASDKKRSM
PVLTEEELDSMCPTAAAVAKIVKPGMTFMELYNAFVDIQDQLIVEKQEKQRVTRVLDEIV
QEVEAKAPILKRQREEYESMQRSMNSLCAKLEQARTEIHSLQKETDEAKKRCSNLEKDNQ
HSERELEDMSQQVRVLLVELEEARGNPVVREETMNLSSSSEIINPRQVSFRSVEELQRQN
QSMLARLRELGEKMEREQTEANSARVTQLEQQLEKVQKELEIIKEQRNQQKQLADSNGRQ
RDMYRILLSQSTGFNLPPQGPTQEATPQMYTPSRPSFPPPTRSTPMRASAAESSQTTQAK
AALKQLNDSFTTYKNEKAVNDRMLNEQNEKLQEQLSAVRSQKAKLSTQLEFASKRYEMLQ
ENVNGYRREIAALHDKSQKMAATAQKHEQIIHTMTQDLRAANEKLALAEVRGENMKKERD
MLKSAESRLNQEKEAMMAEQRNQNLLLTNLKSIQLTMERTETETRQRLNSQIERLERELT
QFKKKLAEEVEQRHMLGRNQDAQLLEAKKQLEAQCALHQKTKELLKNAEQQANLLKQQLS
HAESQNQVSGLGQGQSLGQTNPRAPIRAPLRAPSQTQSQEAQAKLQSELEEVRGRLQQAE
KQISDLQERLQNASTNVEQYRTVVLSLEESLSKEKQARSPVETRLKEAQEFQRGLEKKLV
EAEKEKQELREEKRKAMDIVEKQVNELKRTMKNLQSELQEAEERKAAAITQEQKAMQDSL
QQGKLAAEAQNKYERELMLHAADVEALQAVKKQGLQGNQSRKQLEDKVKQTTTQLQEART
NWNQLEKKLKEDLSKQQKRADELQKQNGLLHQQMESLGAKMAATVQQQQQASRESSLNLS
FSEEGKSQEQILEILRFVRREKEIAETQFEVAEVETLRYKQQVEHQDRELKELQESLNAE
REKLQLTAKTMAQHDEKMKRMENLNMLVETNKMLKEERERLEQELNQTQAKVRKLEADIT
PLQDSNSELSEKNGMLQAEKKLLEEDSKRWKARTQQLVSQQKDTDQEENKKLHSEREAHL
KRIQQLSEETGRLKAEVARTHASVITAQSQAQNLKENLVKVTTERDAKHLDILEKCKTIT
QVKKIGRRYKTQYEELKVQHDKLVAEAAAKPAQEEVQQAQQQAQQAQQASAQEIQSLKDS
LSQAETKVKDLEGQLKNIQEAMNERNTEMGRLKQELTRLQEQSTQAQGTQSEVTRLKQEL
TRLQEQSTQGTQGEVTRLKQELTRLQEQSTQAQGNQGEVTRLKQELTRLQEQSTQAQGTQ
GEVTRLKQELTRLQEQSTQAQGTQGEVTRLKQELTRLQEQSTQAQGTQGEVTRLKQELTR
LQEQSTQAQGTQGEVTRLKQELQEKTAQEESLRQQMADKEEKTKKVFMGAKQKINQLNIA
KEHLTKEVEELKQQREEQEVRLSAIKSQYEGRLHRQDREIRELRDHRDEQPQRDESQDQG
KNKTQEQQQRAPDQRQINQRTSQAADRGSGSSGSSEQPPTANIKPTTVSGGAPSKPSPIP
GNKSTPRASIRPMVPITMPTPTATVMPHTQSESQEVLQSSEGGTPVEHVSVFGSTSGSVR
STSPSVQNITHSQFQPISSQATAFVQPTQQQQAPPTAELASHETEAGPSGQVERPSTSTA
VFGSAIATGGSAGPKRAREVELEARAESADMALENPDEPPIPKKLRIIQRVGLEEENEEG
TDGEAEGSGENQETPDGSQELPDVSFPVLGEVEEEDDGVSQSVPSDHQVTPQPSDTQDSS
EERQPDVIIIDTDSSSREEEEEEAEQYEEEVEEEKDDDDDDEDQGMGREESNEGSGDANE
PFEGDETGPETSEPASENEESMGAIDSTSQKQADSQSGEGSSSTTESFPMAMSDPPKELL
QPTASTTSTFSFSTSPFSPSSSLRLPQSVPRRPPHPLPPRLYIQPPXPELGLGPPPTQRL
SAPIRRQSVGRGPQLTPGIGNMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGV
PRFRFGPPEDMPQASSSHSDLGQLASQGGLGMYESPLFLAAHDEESGGRSVPTTPLQVAA
PVTLFNESHPSDAQDMASQSVPMVTTSTSHHGLAVPGGEAIPGDDGDEVFMEADSEGSGE
ASMDSQAEMDSAQPSDDASLPSTSQEPTSSSADASSSVQPKPSGRPLAQHSLPMRTANRG
RALIRRGGMGFLRAGRGPFGRGNLPR
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagttctgcttcaagttttggagcgtacagagcttaataaactccccaaagct
gctcaaaacaaattagaaaagttccttactgaccagaagaatgaaatcgaatccctcaaa
acgcagcacgagcgtttcaaagcggactgtgagcagcaatactttgacgttgagaagaga
ttggcagagagtcaggagcagattgtgtctcacacccggaattaccagactctcaaagag
gagaataccaaactcatcgaagagctgaacaatctgaaaggtgtggatgtggaatcgtca
gaggagaaggaatcacagcagccgagcaaagccaaatatgagattgaggccgaaaggcgg
gaactggctcgtctgcttgaaaagagaactcaagatgtggaaaatctcaccgaggatgtc
aagcggctcaatgacaagctggtggagaccaacacagccaaaatagatctacagctcaaa
ctggatgagatccaatcttctgaggtctccattcagcaccgtgagaaacgtatggagcag
gagaaggagctactgcagaatcagaacacgtggctgaactctgaactgaagaccaagaca
gaggagctgctatcagtctccagggacaagggcaaggagatcctggagctcaagtgcagc
tttgagtgcaagaaggatgaggtcacaagacttcaaacccaagtcaccaatctgaagaag
agcagtgagaacctgcagaagcgagtggaggacctgatgacaaaactgaaagaggctaaa
gaccattatagcaccatggaggagaagtaccgcaatgaacagaatgcccacatcaagctc
tccaacttgtacaaggggtcagcgtcagatgcagagtccaagaacgaggagttgaacagg
gccgtggaggagctgcacaagctggtgaaggaggctggtgatgcgagacagaacatggag
aagaagctggcagacatggaggggtcaaagagcaaacaggaggctgagctgaaggagaag
tttaagaagatggagcttgagaacgccaacctgcgtgcctcagataagaaaagaagcatg
ccagtgctcacagaggaagagttggactccatgtgtccgaccgcagctgctgtggccaag
attgtcaagcctggaatgacgttcatggagctgtacaacgcattcgtggacatccaggac
cagttgatcgtagagaagcaggagaaacagcgtgtgacgcgcgtgctggacgagatcgtg
caggaggtggaggcgaaggcgcccatcctaaagcgccagcgggaggagtatgagagcatg
cagaggtccatgaacagcctctgtgccaaactggaacaggccaggacggagattcacagc
ctgcagaaagagacagatgaggccaaaaagcgctgctccaacctggagaaggacaaccag
cactctgagagagagctggaggacatgtcccagcaggtgcgcgtcctgctagtggagctg
gaggaggcgcgtggcaacccggtggtccgcgaggagacgatgaacctgagcagcagctct
gagatcatcaacccacgccaggtttccttccgcagtgtggaggagctgcagcggcaaaac
cagagcatgctggcacgtctccgggagctgggggagaagatggagagagagcagaccgag
gccaattctgcacgtgtgacccagctggaacagcagctagagaaggtccagaaggagctg
gagattataaaggagcagagaaaccagcaaaagcagctggctgactccaacggccgccag
agagacatgtaccgcatcctgctgtcccagagcaccggcttcaacctcccaccacaaggc
cctacacaggaggcaaccccccagatgtacacccccagccggccctccttcccccctccc
accaggtccacccccatgagggcttcagctgctgagtcttcccagaccacccaggccaag
gctgctctcaaacagttgaacgactccttcaccacatacaagaatgagaaggcggtgaac
gacaggatgctgaatgagcagaacgagaagctacaggagcagctgtctgcggtccgctcc
cagaaggccaagctctccacacagctggagtttgcctccaagagatacgagatgctgcag
gagaatgtaaacggctataggcgggagatcgctgctctgcatgataagagccagaagatg
gccgccacggctcagaaacatgagcagatcatccacaccatgacccaggatctccgggca
gccaatgagaagctggccttggcagaggtgcgtggtgagaacatgaagaaagagagagac
atgctgaagtcagcagagtccagactgaaccaggagaaggaagccatgatggctgagcag
cgcaaccagaacctcctgctcaccaacctcaagtccatccagctgacgatggagcgtaca
gagaccgagaccaggcagcgtctgaacagccagatagagagactggagagagagctcacc
cagtttaagaagaaactggctgaggaggtggagcagaggcacatgctgggccgtaaccaa
gacgctcaactgctggaggccaagaagcagctagaggcccagtgtgccctgcaccagaag
accaaggagctgttgaagaatgctgagcagcaggctaaccttctgaaacaacagctcagc
catgctgaaagccagaaccaggtttcaggtctgggccagggtcagagcctgggccagact
aacccccgggcacccatcagagcaccgttaagagctccatctcagacccagtcccaggag
gcccaggccaagctccagtcagaactagaggaggtgcgcgggcgtctgcagcaggccgag
aagcagatcagcgatctgcaggagcgcctgcagaacgcgagcactaacgtggagcagtac
cgcaccgtggtgctcagcctggaggagtccctcagcaaagagaaacaggctcgttctcct
gtggagactcgtctaaaggaggcccaggagttccagcgtgggctggagaagaagctggtg
gaggctgagaaggagaaacaggagctccgtgaggagaagaggaaggccatggatattgtg
gagaaacaggtgaatgagctgaagaggaccatgaaaaacttgcagtcagagctgcaggag
gcggaggagaggaaggctgcagccatcacccaggaacagaaggccatgcaggacagcctg
cagcagggcaagctggcagcggaggcccagaacaagtacgagcgggagctgatgctgcat
gcggctgatgtggaggcgctacaggcggtcaagaaacaaggcctgcaggggaaccagagc
aggaagcagctggaggacaaggtcaaacagaccaccacccagctacaggaggctcgcacc
aactggaaccagctggagaagaaacttaaggaggacctgtccaagcagcagaagcgggca
gacgagctgcagaagcagaatggcctgctgcaccagcagatggagagcctgggagccaaa
atggccgccacagtacagcagcagcaacaggctagtagggagagcagcctcaacctgtcc
ttcagcgaagagggcaagtcccaggaacagatcctggagatcctcaggtttgtgcgtcgt
gagaaggagattgcagagacacagtttgaggtggccgaggttgagacactgcgctacaaa
caacaggttgaacaccaggaccgagagctgaaggaactacaagagagcctcaacgctgag
agagagaaactacagctgacagcgaagaccatggcccagcacgatgagaaaatgaagagg
atggagaacctaaacatgctggtggagaccaacaagatgctgaaggaggagagggagcga
ctggaacaggagctaaaccagacccaggcgaaagtacgtaagctggaggcggacatcact
cccctgcaggactccaactctgagctgagcgagaagaatggcatgctgcaggctgagaag
aaactgttggaagaggacagcaaacgctggaaggcccgcacacagcaactggtgagccag
cagaaggacacagaccaggaggagaacaagaagctgcactctgagagagaggcccacctc
aaacgcatccagcagctctctgaggagactgggagactgaaggctgaagtggccaggacc
catgcgtcggttatcacagcccagagccaggcgcagaacctgaaggagaatctggtgaag
gtgaccaccgagagggatgcgaagcacctggatatcctggagaagtgcaagaccatcacg
caggtcaagaaaatcggacgacgatacaagactcagtatgaggagctcaaagtgcagcac
gacaagctggtggcggaggcagcagccaagccagcccaggaggaggtgcaacaggcccag
cagcaggctcaacaggcccagcaggcctctgcccaagagatccagagcctgaaggactcc
ctcagccaggctgagaccaaggtcaaagacctggagggacaactgaaaaacatacaggag
gcgatgaatgagcgcaacacagagatggggcggctgaaacaggagctgacccggctccag
gaacagtctacacaggcccagggaacacagagtgaagtgacccggctgaaacaggagctg
acccgcctccaggaacagtctacccaggggacccagggtgaagtgacccggctgaaacag
gagctgacccggctccaggaacagtctacccaggcccaggggaatcagggtgaagtgacc
cggctgaaacaggaactgacccggctccaggaacagtctacccaggcccaggggacccaa
ggtgaagtgacccggctgaaacaggagctgacccggctccaggaacagtctacccaggcc
caggggacccagggtgaagtgacccggctgaaacaggagctgacccggctccaggaacag
tctacccaggcccaggggacccaaggtgaagtgacccggctgaaacaggagctcacccgg
ctccaggaacagtctacccaggcccaggggacccagggtgaagtgacccggctgaaacag
gagctgcaggagaagacggctcaggaggagtcgctacggcaacagatggccgacaaggag
gagaagaccaagaaggtcttcatgggcgccaagcagaagatcaaccaactcaacattgcg
aaggagcatctgaccaaggaggtggaggagctgaagcagcagcgggaggagcaggaggtg
cgtctgagtgctatcaagtcccagtatgagggccgtctgcaccgacaggaccgagagatc
agggagctccgagaccaccgtgacgaacaacctcagagagacgagtcccaggaccagggg
aaaaataagacccaggagcagcagcagagagctccagatcagaggcagatcaaccagagg
acttcccaagctgcagacaggggaagtggttcttctggctcttcagagcagccccccact
gccaacatcaaacccaccacggtgtcgggcggtgcccccagtaaaccttcccccatcccc
gggaacaagtccacccccagggccagcatccgacccatggtgcccataaccatgcccacc
cccacggccactgtcatgccccatacacagtctgaaagccaggaagtgctgcagtcctct
gagggtggaacccccgtggaacacgtgtctgtgttcggcagcaccagcggctcagtccgc
tccaccagccctagcgtccagaacatcacgcactctcagtttcagccaatcagcagccag
gccaccgccttcgtccagccaacccagcaacagcaggccccgcccaccgctgagctggcc
agtcatgagacagaggcgggccctagtggtcaagtggagaggccctccacttctacggcc
gtatttggctccgctattgctacagggggctctgctgggccaaagcgtgcccgcgaggtg
gagctggaggctcgggcagagagcgccgacatggccctggagaacccagacgaaccaccc
atccccaagaagctccgtatcatccagagagtgggactggaagaggagaatgaagagggc
actgatggagaggctgaggggtcaggggagaaccaggagactccagatggcagccaggaa
ctaccagacgtgtcctttcctgtactgggagaggtagaggaagaggatgacggggtgtcc
cagtctgtcccctcagaccaccaggtgaccccccaaccctctgacacccaggactccagc
gaagagcgtcagcctgacgtcatcatcatcgacacagacagctccagtcgagaagaagag
gaggaagaggcagagcagtatgaggaagaggtggaggaagagaaggatgatgatgatgat
gacgaggaccaggggatgggaagagaggagagcaacgaggggagcggagacgccaacgag
ccgtttgaaggagacgagacgggccctgagacctcggagcctgcctcggagaacgaggag
agcatgggagctatagactccacctcccagaaacaggctgactcacaaagcggtgagggg
agcagcagtaccaccgaatccttccccatggccatgtccgacccccccaaagaactacta
cagcctaccgctagtactaccagcactttctccttctcgacctcccccttctccccctcc
tccagcctgcgcctgccccagtctgtcccccgccgacccccacaccccctgcccccacgc
ctctacatccagcccccgngccctgagctgggcctgggacctccacccacacagaggctg
tctgcgccaatccgccggcagtctgtaggcagaggaccccagctcacgcctgggataggc
aacatgcaacacttctttgatgacgatgaccggatggtccccagtacgcccacgctggta
gtgccccaccggactgatggctttgctgaggccatccattctccacaggtagcaggagtt
cccaggttcaggtttggtcctcctgaagacatgcctcaggccagctcgtcccactctgac
ctcggacagcttgcctcacaaggaggtctggggatgtacgagagtccactgttcctggcc
gctcacgacgaggagtctggagggaggagtgttcccaccacgcccctgcaggttgctgcc
ccagtgacgctcttcaatgagtcccacccctctgatgcccaggacatggcatcccagtct
gttcccatggtgacgacatccacgagccaccacgggctggcagtccccggcggcgaggcc
atcccaggagatgacggtgacgaggtgttcatggaggcagatagtgaagggagtggtgaa
gcgtccatggatagccaggctgagatggactctgcccagccgtcagacgatgctagtctg
ccctccacaagccaggagcccacctccagctctgccgacgccagcagtagtgtgcagccc
aagccctccggccgccccttggcccagcactctctgcccatgagaacagccaacaggggc
agggcgctcatccgcagaggaggtatgggcttccttcgagcaggaagaggccccttcggt
agaggaaacctaccccgctaa
DBGET
integrated database retrieval system
