Oncorhynchus masou masou (cherry salmon): 135558607
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Entry
135558607 CDS
T10723
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7-like isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135558607
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135558607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
135558607
NCBI-ProteinID:
XP_064848607
LinkDB
All DBs
Position
17:complement(16134159..16251235)
Genome browser
AA seq
3188 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPIGQQEHQGYGSLSSNSLHHPSQGG
PGQPKMGHPYDPFAGYEQQQGNGPAVNGMVTPHSRYHNSPQQPGGGHHVYPRAQGDGHGQ
SFPDGGAVWGPQTGPGQGRPPFQQQQASPQGPSHQQHGPSGPQAPSHQQHGPSGPQAPSH
QQHDPSGPQDHGHRMGPYMGRSDYATMQGHPGQTQTPPRINHFPPGMGQEPNLYMGHVGL
QQNSSMTGHPAQQQQPPQQFLHRPGQGPVHTQDHMASHTSHQQHQGLAGRPHQNMGFNMH
GQAASPGAVTSSGPYPPYPHYGNLNQGLAGSAGMSPGMSLSSNNNSSASGPMGTDQVQCY
PNAGGGPQCYPDPQVHQQPVHPNPITGQPMHPSQAQATPHKQPHLPTPPHGSYGSPTSPM
KGMGTTAVTPPPQQVRPPSAGLAPEVGGYPGVPLQAPNPMAPPQRNTTPLGVQQPQHHSQ
HLSHPQQHPHMPQSQQLYQGMSPNQIGPLDQVRPPGPMAHGEHPGPQNQRLLTPQQQAPK
SGLQPPPMAFQQQVHPAQTALPPSQAQTHLAGPHHQSSPPNQPPWAPAGHQSPPTPQKVP
HIQYSTSSEMTASDRTPASGVNLQPANRDKKPTEQKPKKKKAMVEGEKKPKKKKGCIEEC
GKEGKRKVGDGPCAEVNCLTGALEESLVVKTKRKPKEPKEPKTLKTPKTPKEPKEKAKST
TPKVKMPKKPRSTKKVESAEGSGSSVKETKRMREPSVSSDVEKSPPGPSDEDDDDDGVQK
RRSSRQVKRKRYTEELEFRISDDDGDVSPAPKLPFNTSEQQEVETEGPVVEKILSIRMGK
REMESGEKMEVEEFYVKFKSFSYLHCRWADLEELEKDRRIHQKVKRFRAKQALPTFVTEM
DDEPFNPDYVEVDRVLDVSESTDENGEPVKLYLVKWCSLPYEDITWELKADIDQTKIDEY
EAVVARQHETKRVERPPTENWHKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILA
DEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQAS
RKTIQAYEMNYRDVQGRVIKGAYKFHAVITTFEMILTDCPELRSVSWRCVVIDEAHRLKN
RNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTE
EQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKG
GPGGGGGAWGGGGAQVPNLLNTMMELRKCCNHPYLINGAEEKILDDFRENHHAEMPQFHL
QAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRG
NLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR
IGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVPQLSKKEVED
LLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTQTITIESEGKGSTFAKASFVAAGNRTD
ISLEDPDFWQKWAKKAELDTEAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESD
GENEKPLTKLRRPQDRAHGYPRSECFRVEKNLLVYGWGRWGDILSRGRFKRPLQEQDVET
ICRALLAYCLLHYRGDENIKRFIWDLITPSEDGQSRTLTNHSGLSTPVPRGRKGKKGKPA
PPAPPQLPRAEWLASCNPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDHADRI
LEGTDSSEMDIWIPQPFHAEVPADWWDSEADKSLLIGVFKHGYEKYNSMRADPALCFLER
VGMPDAKAIAAEQRGADMMADGPEGEDEDPEYKPLRMTFKDEMEDFANSPLDDKDETVDV
ESGESKPGENVAGGSRGAGRLYWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGR
RRRRPREHLFSMVTDGGGAYVQEDGAFMAEGSPYMAKGGAFIPEATVLPAEGGAAFKERR
QRWTRREESDFYRVVSTFGVIYDTDRQLFDWTQFRAFARLDKKSDESLEKYYFSFVAMCK
RVCRMQVKSNTELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPNPLLGERLRLCQP
SSDLPEWWACCRHDHDLLLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGASAGVPQPP
RDGALSTASSSSTEQAKATAGAEKSLPVQEEEEGKEMKEEGDDIPCTKPEKPDEGKEEEM
EAKKEEMAGSPKKVKDEEEENGEEEDREEKVEVTGDADGETSKEAKPGKEYKAPTEETKD
QDKKLDFQEKPESPKASESPKASESPKASESPKASESPKASESPKASESPKASESPKASE
SPKASEEQGTKKEEREGSPAKSPKPVAEKGPDEEKMEEDDKSEKSSQAEAGATSEQKNFD
EESNASLSTTARDETRDGFCPEEEPSAIPALQERATSSFWPKDRVMINRMDNICDAVIKG
KWPANRRQFFDFPGLLPGYPGPMTSESPMPRRSLDVLSIAAAAQTNFSGSEDLTLSPQVN
EDALSISLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHAAESQSQAMDLTKGILH
QHHKSSAPSPASYSSSMVSPAALKAQMELLQAATPSRHRANCSLAEADLPTRRRRGRRKN
VEGLELLFMRGATEDSERTKASVEGLQMPPRSHRHNIPSTSARVPSVSAMEDREAGTPSN
KDLSDWLGQHPTYTMDMPTAYTPKSEETLLSSQFPKPKQKRHRCRNPNKIDINTLTGEER
VPVVNRRNGRKMGGAMAPPMKDLPRWLLENSDFAVAPDWTDIVKQSGFLPEAMFDRLLTG
PLVREEGVRRRGRRPKSEIAKATAAASAASSGGLNPLLINGLFGGMDLTSLQGLQSLQSL
QLQLMGFPGMGGADAKHASAMLPLMLPGMAGMGVLPNMFGLGGLFASNLAAASPAAASNG
TNNEDDSDETSKRDAREGGEEQDEEKDDTGEEEESSKAIGEAAALNVAAAAMASSGMSAN
SLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTLPGFPRTALTDLQSAMAGAMGVASGAQGQ
EKEPSQVALDCPAATADPETADDSDSAESLEKTAESSALEDETSALAGEADSPEDLEEGE
DALEEEEK
NT seq
9567 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggatgttgagcctgtttggggatgatgccaacctgttctcagacggg
ttggagggcctgggggactgtggcttcccccagggccagcccaaccccataggacagcag
gagcaccagggctacgggtcgctctcctccaactcactccaccacccctcgcagggcgga
cccggacagcccaagatgggccacccctacgacccctttgcaggctacgagcagcagcag
ggcaacggtcccgccgtcaacggcatggtgaccccgcactcgcgctaccacaacagcccc
caacaacccgggggggggcaccatgtctaccccagagcccaaggcgatgggcacgggcag
tccttccctgacggaggagccgtatggggcccccagactggccccgggcagggcaggcct
ccattccagcagcaacaggcatccccccagggcccctcccaccagcaacacggcccctct
gggccccaggccccctcccaccagcagcacggaccctctgggccccaggccccctcccac
cagcagcacgacccctcagggccccaggaccacggccaccgtatgggcccctacatgggc
cggtccgactatgccactatgcagggccaccctggccagacccagacgccacccaggatc
aaccacttccctccgggcatgggccaggagcccaacctctacatgggccacgtggggctc
cagcagaactccagcatgacgggccacccggcacagcaacagcagcccccccagcagttt
ctccaccggcccggccagggccctgttcacacccaggaccacatggcctcccacacctct
caccagcagcaccagggcttggccgggaggccacaccagaacatggggtttaacatgcac
ggccaggcagcctctcctggtgctgtaaccagctcagggccgtaccccccctacccccat
tacggcaaccttaatcagggattagccggcagtgcagggatgagtcccggcatgagcctc
agcagcaacaacaacagtagtgcaagcgggcctatggggacagaccaagtccagtgttac
cccaacgcagggggtggcccacagtgctacccggatcctcaggtacaccagcagcctgtc
caccccaacccaatcaccggccagcccatgcacccctcccaggcccaggccaccccccat
aagcagccccacctccccacaccacctcatggatcttacggctctcccacctcccccatg
aagggcatgggaaccactgcggtcacacctccgcctcaacaggtccgaccccctagtgca
ggtcttgctcccgaggtaggggggtaccccggagtgccactccaggcccctaaccccatg
gccccccctcagagaaacaccactcccctgggcgtgcagcaaccacaacatcattcccag
cacctctcccacccacagcagcacccccacatgccccagagccagcagctctaccagggt
atgtcccccaaccaaataggccctctcgaccaggtgagacctccaggtcctatggcccac
ggtgagcatccaggaccacagaaccagcggctgctcaccccccagcaacaggcacccaaa
tctgggctgcagcctcctcccatggccttccagcagcaggtgcacccagcccagaccgct
ttgcccccatcgcaggctcagacacatctggccggcccccaccaccagagctccccaccc
aaccagccaccttgggcgccggcaggacaccagtcgcctccaaccccccagaaagtgcct
cacattcagtattctacgtcatctgagatgacagcttctgacaggacacccgcttcgggg
gttaacctccagccagccaaccgtgacaagaagcccaccgagcagaaaccaaaaaagaag
aaagcgatggtggagggggaaaagaagcccaaaaagaagaaaggatgtatagaggaatgt
ggcaaggaggggaaacgaaaggtcggggacggtccctgtgcggaggttaactgtctgaca
ggtgccctggaggaatcgcttgtggtgaagacaaagaggaaaccaaaggagcctaaagag
cccaagactctgaaaacacccaagacccccaaagagcccaaggagaaggccaagagcact
acccccaaggtcaagatgcccaagaagcccagaagcactaagaaggtggagtcagcggag
ggcagtggcagcagtgtgaaggagactaagaggatgagggagccctcagtcagctccgat
gtggagaagtcacccccaggcccctccgatgaggacgacgatgatgacggtgtccagaag
cgtcgttccagtcgtcaggtgaagaggaagcgctatacagaggaactggagttcaggatc
tcagacgatgatggagatgtttcccctgctcccaagttgcccttcaacacctctgaacag
caggaggtggagacagaggggcctgtggtggagaaaatcctgtccatacgcatggggaaa
agagagatggaatcgggagagaaaatggaagtggaagaattctatgtcaaattcaagagc
ttctcctacctgcactgtcgctgggcagatctggaggagctggagaaggacagaaggatc
caccagaaggtcaagcggttcagggccaaacaggccctgcccaccttcgtgacagagatg
gatgacgagcctttcaaccctgactacgttgaggtggaccgggtactggacgtgtcagag
agcacagatgagaacggagagcctgtaaagctgtacctggtgaagtggtgttccctgccc
tatgaggatataacttgggagctgaaggccgacatcgaccagaccaagatcgatgagtac
gaggccgtggtggcccgtcagcacgagaccaaacgcgtggagcgacctcccaccgaaaac
tggcataaatccgagagttccagggattataaaaacgacaacgcactcagggaataccag
ctggagggagtgaactggctgctcttcaactggtacaatacacggaactgcatcctagca
gatgaaatgggcctgggcaagaccatccagtccatcacattcctctatgagatctacctg
aaggggatccacgggcccttcctggtcatcgcccccctctccaccattccaaactgggag
agggagttccgcacctggaccgaactcaacgtgatcgtctaccacggcagccaggccagc
cgcaagaccatccaggcctacgaaatgaactaccgcgacgtgcagggtcgtgtgataaag
ggagcgtacaaattccatgcggtcatcaccacatttgagatgattctgacagactgtccg
gagctgcgcagcgtctcgtggcgctgtgtggtcatcgacgaggctcaccgcctcaagaac
aggaactgcaaactgctggagggtcttaagatgatggacatggagcacaaggtgctgctg
accgggacccccctgcagaacacggtggaggagctcttcagtctgctcaacttcctggag
cctgaacgcttcccctctgagaacaccttcatgcaggagtttggagacctcaagactgag
gagcaggtccagaagctgcaggccatcctgaagcccatgatgctgcgacgtctcaaggag
gatgtggagaagaacctggcccccaaggaggagaccatcattgaggtggagctgaccaac
atccagaagaagtactaccgggccatcctggagaagaacttctccttcctgtctaaaggt
ggaccgggaggagggggcggcgcatggggaggcggaggtgcacaggtccccaacctgctc
aacaccatgatggagctgaggaagtgctgcaaccacccctacctcatcaatggtgcagag
gagaagatcctggacgacttccgtgagaaccaccatgccgagatgccccaattccaccta
caggccatgatccaggcagcgggcaagctggtgctgatcgataagctgctgcccaagctg
aaggctgggggacacagggtcctcgtcttctcccagatggtgcgctgcctggacatcctg
gaggactacctcatccagaaacggtacccgtatgagcgtatcgatggccgtgtgaggggt
aacctccggcaggctgcaattgaccgcttctctcgtccggactctgaccgatttgtattc
ctgttgtgtacccgggccggaggtctgggcatcaacctgaccgctgccgacacctgcatc
atctttgactctgattggaacccccagaatgatttacaggcgcaagccagatgccacagg
attggccagagcaaggcagtgaagatctacaggctgatcaccaggaactcctatgagagg
gagatgtttgacaaggccagccttaagctgggcctcgacaaggctgtgctgcagtccatg
agtggccgagaaaatgcagccaacggggttccacagctgtctaagaaggaggtggaggac
ctcctccgtaaaggagcctacggagctctgatggacgaggaggacgagggctcaaagttc
tgcgaagaggacattgaccagatcctcctgagacgaacccagaccatcaccattgagtcc
gagggcaaggggtccaccttcgccaaggcgagctttgtggctgctgggaacaggacggac
atttccctggaggacccggacttctggcagaagtgggccaagaaggcggagcttgacacg
gaagccatcaatggacggaacacccttgtgattgacactcccagggtgcggaagcagaca
cgccactacagctcaatgaaggaggacgaattggcagagttctcagagttggaaagtgac
ggcgagaatgagaagcccttgaccaaactcaggcgaccccaggaccgagctcacgggtac
ccccgcagcgagtgcttcagggtggagaagaacctgctggtttatgggtggggtcgctgg
ggagacatcctgtcccgcgggcgtttcaagcggcccctgcaggaacaagacgtggagacc
atctgccgcgccctgctggcctactgcctgctgcactaccgtggcgacgagaacatcaag
cgcttcatctgggacctcatcacgccctctgaggacggacagagccgcacactcaccaac
cactccggtctgtctactccagtaccgcggggtcgtaaggggaagaaggggaaaccagcc
ccacctgcccctccccagctccccagggcagagtggctggccagctgtaacccagacctg
ctactgcaggaggacagctacaagagacacctcaaacaccactgtaacaaagttctcctg
agggtccgtatgctctactatctgcgacaggaagtcatcggtgaccacgccgacaggatc
ctagagggaacagactcaagtgaaatggatatctggatccctcagcctttccacgccgag
gtgcccgccgattggtgggacagcgaggcagacaaatcgctgctcatcggtgtcttcaaa
cacggctatgagaagtataactcaatgcgtgccgaccctgcgctgtgtttcttggagcgg
gtgggcatgcccgacgccaaggccatcgctgcagagcagaggggggcggacatgatggca
gatggtccggagggagaggatgaagaccccgagtacaagcctctccgcatgacctttaaa
gatgagatggaggactttgcgaactcacccctggatgacaaagatgagactgtggacgtt
gagagtggtgaatctaaaccaggtgagaatgtagcaggcggcagcagaggggcgggtcgt
ctgtactggccggcggcctcggccctcaccgctagactccgccgcctcatcacggcctac
cagcgcacgcacaagagggagcagctccgccaggaagccatggcccggcccgacggacgc
cgccgccgccggccccgtgaacatctcttctccatggtcacagacggaggaggggcctac
gtgcaggaggacggagccttcatggcagagggaagtccttatatggccaagggcggagct
tttatacctgaggcgacggtgctcccggcggaaggaggggccgccttcaaagagaggcgt
cagaggtggaccaggcgtgaggaatcagacttctaccgggttgtgtccacgtttggtgtg
atctatgacacggaccgccagctctttgactggacccagttcagggccttcgcccggctg
gacaagaagagtgacgagagcctggagaaatactacttctccttcgtggccatgtgcaag
cgggtgtgtcgcatgcaggtcaagtccaacacagagctcccagaccctaccctgatcatc
gaccccatcacggaggagcgcgcctcacgcaccctctaccgcattgagctgctgcgtcgc
attcgcgagcaggtgctgcccaaccccctgctaggtgagcgcctgcgcctctgccagcct
agctccgacctgcctgagtggtgggcctgctgccggcacgaccacgacctcctcctgggc
gcctccaagcacggcgtgagccgcactgactaccatatcctcaacgacccggcgctgggc
ttcctggaggcccacaggaagttcaccaagggggcatcggctggggtgcctcagccgccc
cgcgatggagctctctctactgcttcttcctcttctactgagcaggccaaagctactgct
ggtgctgagaaatccttacctgtccaagaggaggaagaagggaaggagatgaaagaggaa
ggtgatgatattccatgtactaaacctgagaaaccagacgaaggcaaggaagaagagatg
gaggcgaagaaggaagagatggccgggtctcccaagaaggtgaaggacgaggaggaagag
aacggagaggaggaagaccgagaggagaaagtggaggtcaccggcgacgctgacggagag
acttccaaggaggccaaacccgggaaggagtacaaagctcccactgaggagaccaaggac
caggacaaaaagctggacttccaggagaaaccagagtctcctaaagcatcagagtctcct
aaagcatcagagtctcctaaagcatcagagtctcctaaagcatcagagtctcctaaagca
tcagagtctcctaaagcatcagagtctcctaaagcatcagagtctcctaaagcatcagag
tctcctaaagcatcagaagagcagggaaccaagaaggaagagagagaaggaagccctgcc
aagtctcctaaaccagtggctgagaaagggcccgatgaggagaagatggaggaagacgac
aagtctgagaagtcctctcaagctgaagcaggcgccacctcagagcagaagaactttgac
gaggagagcaacgcctcactgagcaccacagccagagacgagacccgcgacgggttctgc
cccgaggaagagccctctgccatcccggccctccaggagagggccacctcatccttctgg
cccaaggaccgtgtcatgatcaatcgcatggacaacatctgcgatgcagtcatcaagggc
aagtggcccgccaaccgacggcagttctttgacttcccgggcctgttgcctggatacccc
ggccccatgacgtctgaaagccccatgccgaggcggagcctggacgtactgtcgattgca
gcggccgctcagaccaacttcagtggcagcgaggacctcaccctctcgccccaggttaat
gaggatgctctgagcatatcattgccaaagcagcgtcgtcgcaggcggcggaaggtggag
atagaggcggagcgtgcggccaagcgcaggaacctgatggatatggtggcccagctcaga
gaatctcacgctgcagagtcccagagccaggccatggatcttaccaagggtattctgcac
cagcaccacaagtcttcagcgccgtccccggcgagctactccagcagcatggtgtcacct
gctgccctcaaggcacagatggagcttctgcaggcggccacaccctccagacacagggcc
aactgctcattggccgaggctgacctgcccaccaggaggaggcggggccgcaggaaaaat
gtggaggggctggagctgctgttcatgagaggagccacggaggattcagagaggaccaaa
gcttcagtggaggggttgcagatgcccccacgttcccatcgccacaacattcccagcacc
tccgcccgtgtcccctctgtcagcgctatggaggacagggaggctggtaccccctctaac
aaagacctgagtgactggctcggacagcaccccacatacaccatggacatgcctactgcg
tacacaccaaagagtgaggagactctcctctcctcccagttccccaaacccaagcaaaag
agacaccgctgccggaaccccaacaagatcgacatcaacacgctcaccggagaagagagg
gttcccgtggtcaaccggagaaatggaagaaagatgggtggagccatggcccctcccatg
aaggatcttcccagatggctcctggagaactcagattttgccgtcgctccagactggact
gacattgtcaagcaatcgggcttcctccctgaggccatgttcgaccgtctgctgactggg
cccttggtgcgtgaggagggcgtccgtcgtcggggaagacgtcccaaatcggagatcgcc
aaggcaacagcggctgcctcggctgcatcctctgggggccttaaccccctgctgataaat
ggcctgtttggaggcatggacctcaccagcttgcagggcctacagagcctccagagtctg
cagctgcagctcatgggcttccccggcatggggggggctgacgctaaacacgcctcggcc
atgctgcctctcatgctgcctggcatggctggtatgggcgttctgcccaacatgtttggc
ctgggaggcctgttcgcaagcaacctggctgcagcctcccctgctgcagcctccaatggc
accaacaacgaggacgattcggacgagacatcgaagagagatgccagggagggtggagaa
gagcaggatgaggagaaggacgacactggggaggaggaagagtcgagcaaggctattggg
gaggctgcggctctgaatgtggctgctgccgctatggcctcctccggcatgtcggctaac
tccctggccttcaatcccttcctgctctccaccatggccccggggctcttttccccctac
atgttcctgccccctggcctgggaggtctcaccctgcctggcttcccccgcactgccctg
actgacctgcagagtgccatggctggagccatgggggttgcctctggagctcagggccag
gagaaggagcccagccaggttgccctggactgccctgctgctaccgcagacccagagact
gctgatgacagtgactcagctgagagcctggagaagactgcagagtcgtctgcgctagaa
gatgagacctccgcattggcaggggaagccgactcaccggaagacctggaggaaggagag
gatgcccttgaggaggaagagaagtga
DBGET
integrated database retrieval system
