Oncorhynchus masou masou (cherry salmon): 135558673
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Entry
135558673 CDS
T10723
Symbol
smg7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
135558673 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
135558673 (smg7)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135558673
NCBI-ProteinID:
XP_064848762
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Position
17:complement(20434347..20470337)
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AA seq
1184 aa
AA seq
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MNLCAQYLRQAEALKADMTDFKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQTNTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALAKAVESRDEVK
TKWSVSDFIKAFIKFHGHVYLSKSLEKLNNLREKLEEQFQRLILQKAFSSQQLVHITIIN
MFELHHLRDFGNETDDQSFSSEEQIGWFQLLGLFMSFLGVMCSRALLNKNRGEEIMGECP
LPAIKVSLDWLKLRPTVFQDGAVDRRQYVWPWLVSILNSFQPKEEDVSCASMTPLPEEFE
LQGFLALRPALRTLDFTKGHQGVAVDKEGLPVRARHQRLISLGKWVADNQPGLIQYKVSD
RLLLFITDIEELAIEEPQEKDAPVLQESSNSEQTPNEGNMGLKSVLSMGKTQNSVLEIGE
RPVVTFKENIKPREQSREPSRNHHQKEAGKERRDFGKGNGVPGKGEQKRDGKRKSEVKKN
SHEKAVDAGKQVKAQSDMRKTPVSEARKTPVTQTQTTCSSQFIPIHHPGAFPPLPSRQGF
PPPAYVIPPPVAFSMNPGFTFSTGMSVPGPFLQSASHPQQPGAQQQVQGQTGKPSHIPYS
QQRPSVPGAMNQGAPQGQPQQQPSQTMQQVQLQVQALVQQQQSPTKPVQPVQLGKSPPHH
PGMQQYMQVDQAGQMWGQHQAQQHQTQPTMQKMQAMQMPVKQPYYMGSPQDPLKLFEQQQ
YAMQTVPQQNSMDKKMKYPDVKMQDFYWDPSYRMGDNRPIVGERMGKRLPPGAFHPDQDN
TPRGPPFEDKSSPLLPPDLLKSISDFEEEEELAFTKPHGFYQALAGPLSTAPGRNIFLPN
QSRMESGSEVMGQSSLMPLSGFPIQESSYQNNSIFSQAYGKNMAPNPKPDAPMLHQEPSL
YSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHGSIPFSNFGPIGTPDN
RDRRMVDRWKVEKTPVSGFGLDYLPSASSSSDHRTPENSWHQGNTPSSSWAAQELPMEDS
STVLLDSLKSIWSSSMMQPGPSALEQLLMQQKQQRGRGTMNPPH
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccaatatttacggcaggcagaggccctgaaggctgacatgacagat
tttaagcttggtgcagcagaggtttggacttcaaggcaagcgcttcaggacttgtaccag
aagatgctggtgactgatctggagtatgctttggacaagaaagtggagcaagatctctgg
aaccatgcttttaaaaatcaaataacaacactacagagtcaagccaagaaccgagccaac
cccaatagaagtgaggtgcaggccaatctgtccctatttctggaagcagctagtggattc
tacacacaattactacaggagctgtgtaccgtgttcaacgtggacttgccttgccgtgtg
aagtcatctcagcttggaattatcagcaataaacagaccaacaccagcgccattgtaaaa
ccccaacccagctcttgctcttatatctgccagcattgtcttgtccacctcggagacatc
gcacgatatcgcaaccaaaccagccaagcggagtcctattacagacacgcagctcaactt
gtcccttcaaatggtcagccttacaatcagctggccatcctggcctcctctaaaggggac
cacctcacaacgatattctactactgcaggagcattgccgtcaagttccctttccctgca
gcctccaccaacctgcagaaagctctcgctaaagctgttgaaagccgcgatgaggtcaaa
acaaagtggagtgtgtcagatttcatcaaggctttcatcaagttccatggtcacgtttac
ctgagcaagagcctggagaagcttaacaacctgagagaaaagctggaagaacagtttcag
cggctgattctgcagaaagccttcagctcccagcagctggtccacatcacaattatcaac
atgtttgagctgcaccatctgagggacttcggcaatgaaacagacgaccagagcttcagc
tccgaggagcaaatcggctggttccaacttctcggtctcttcatgtcatttcttggtgtc
atgtgtagccgagcactgctgaacaagaaccgaggagaggagatcatgggagaatgtcca
ttgccagccatcaaggtgtccctggactggctcaaactacgacctaccgtttttcaggac
ggtgccgtggacagacgacagtatgtttggccttggctggtgtccattctgaacagtttc
caaccaaaggaagaggatgtttcctgtgcatcaatgacaccacttccagaggagtttgaa
ctgcaggggtttttggctctcaggccagcgctacggacccttgacttcactaaaggccac
cagggtgttgctgtggacaaggagggtctgccagtccgtgcccgtcatcagaggctcatc
agcctggggaaatgggtggcagacaaccagccagggctgattcagtacaaagtcagcgac
cgcctgctgctgttcatcaccgacatcgaggaattggccatcgaggagccccaggagaag
gatgcccctgtgctccaggagtcctccaacagtgagcagacccccaacgagggcaacatg
ggcctgaagtcagtcctgtccatgggcaagacccagaacagcgtgttggagatcggcgag
aggcccgtggtgaccttcaaggagaacatcaagcccagggagcagagcagggagcccagc
cgcaatcaccaccagaaggaggcagggaaggaacggagggacttcggcaaaggcaacggg
gtgccgggaaaaggagagcagaagagggatggcaagaggaagagtgaggtgaagaagaac
agccatgagaaagctgtagacgcagggaaacaggtgaaagcccagtcggatatgaggaag
acgccagtgtctgaggccaggaagactccagtcactcagacccagactacctgctcctcc
cagttcatccccatccaccacccgggagccttccctccactgcccagccgacaaggtttc
ccccctccggcctatgtgatccctcctcccgtggcgttctccatgaatccgggctttacc
ttctctacgggcatgtctgtccccgggccgttcctgcagtcggcctcccaccctcagcag
ccaggtgcccagcagcaggtgcagggtcagactgggaagccgtcgcacattccatacagc
cagcagaggccgtcagtgccaggggcgatgaaccaaggggccccccagggccagccccag
caacagccttctcagaccatgcagcaggtgcagctccaggtccaggctcttgtccaacaa
cagcagtcacccaccaagcctgtgcagccagtacagctgggcaaaagcccacctcaccat
ccagggatgcagcagtacatgcaggtagatcaggctggacagatgtggggccagcaccag
gcccagcagcaccagacccagcccaccatgcagaagatgcaggccatgcagatgcctgtc
aagcagccctactacatgggaagcccccaggaccccctcaagctctttgagcaacagcag
tacgccatgcagacggtgccccagcagaacagcatggacaagaagatgaagtacccggat
gtgaaaatgcaggatttttactgggacccttcctaccgcatgggggataacagaccgata
gtgggggagaggatgggcaagcggctgccccccggggccttccaccccgaccaggacaac
acacccagagggcctccttttgaggacaagagctcccctcttctgcctccagacctgtta
aaaagtatatcagattttgaggaggaagaagagctggcctttactaagcctcatggtttc
taccaggccttggctggccctcttagtactgctccaggacgaaatatatttttgccaaat
cagtcaagaatggaaagtggctctgaggtgatgggccagtcttctctcatgcccttatct
gggttcccaattcaggagagttcctatcaaaacaacagcattttcagccaggcatatggg
aagaacatggctcccaaccccaagcccgacgctcccatgcttcaccaggaaccttctctc
tactccctgtttgaaggaactccatggtccccgtctcttcctgccagctcagaccactct
acaccagcaagccagtccccccattcttccaacccaagcagtttaccttcttctccaccc
acgcacaaccatggctccatccccttctccaacttcggccccataggaacacctgacaac
cgagacaggaggatggtcgaccgctggaaggtggaaaagacgcctgtgagtgggtttggt
ctggactacctgccctctgcgtcgtcgtcttcagaccaccgaacccctgagaacagctgg
caccaggggaacacccccagcagctcctgggccgcccaggagttgccaatggaagactcc
tccactgtgctcctggacagtctgaagtccatctggtctagctccatgatgcagccgggg
ccttcggccctggagcaactcctcatgcagcagaagcagcagaggggccggggcaccatg
aaccctccacactga
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