Oncorhynchus masou masou (cherry salmon): 135558674
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Entry
135558674 CDS
T10723
Name
(RefSeq) laminin subunit gamma-2-like isoform X1
KO
K06246
laminin, gamma 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04382
Cornified envelope formation
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135558674
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135558674
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135558674
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
CAP_N-CM
TACC_C
Motif
Other DBs
NCBI-GeneID:
135558674
NCBI-ProteinID:
XP_064848767
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Position
17:complement(20485538..20498715)
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AA seq
1150 aa
AA seq
DB search
MRILIYLIPVRFSVTMMSSWIFLCGLSLCTWSSIQGTYRYGGSDICKCNGKSRYCLPDSG
GLHCVDCQDNTEGRHCERCKEGFHHQRAGDSCVPCNCSSKGSVGAHCDSRGRCSCRAGTQ
GEKCDRCQNGTPISSNGCAANGGQLTDNSVTAQSLPCFCYGHSTECSTAKGYSVHTVTST
FDDGTEGWRAATVHGVTPSQVHFHWSPTHRDIEVISKDILPVYLYAPDSYLGNQELSYGQ
NLSFSLRLDRGVRHPSMADVVLEGSGLSVAASLGDLRTIVPSGQKITYTFRLDEQQGSEW
RPHLSSFQFQTLLHNLTDIKIRGTFGENGRGYLDDVRMESARRGAGSPATWVQKCSCPVG
YEGQFCEKCAAGYKRSLPSKGPYSSCEPCSCRGGSCDSETGDCYSADETPGRQICPPGYY
NDPAQPQSCQKCPCPNGGACSVSPGSLEVKCDLCPPGTTGSHCHTCQDGFYGDPLGEDGI
QRPCRRCQCNGHMDPNTVRSCDPQTGQCLKCLNYATGFFCESCLEGYHHSMPSEACKPCG
CNSQGSLYNKCSDQGQCSCREGFEGLKCQRSACPSCFNLVKTEMEGYSRKLREIETLFTG
MESGSLPVNDAQMEKAIRTAEDIVTDLQRNAQTLSESEKDLQARLSDISATQLSEGRDIQ
AISNTVDNIKLQDQKYQRQVSDVQTLISDVRRKLEEARFNIKQAEFPLGDAGVGTDTLSS
LVQRATDLAEKQRSKSETMEKTANGALAKSEKSLALMRSVMTGENKIKELISDLKTKYDE
NSAQVKAMESLATRLSSSARDESRMATGTLEQIASLEPGIPRPLKKDIDSVLAKLDGLRE
RVEKNLTAYQALQEDTQEDKAAVEDLLAQGKAAQQKYDKLLGRANHAKADTELALKDITD
NIDGVDNVLEMLRGFDGQINKNKALADEAIKKLPGINATIHQAVGNNSETLFIIGSVSGD
YNDALGTVSSLEAVVSRLEGMSGSLPVPPAGLLKDATKLKEDVQGLQKQAVATVAKVAAE
KANAEIQKDRAAEASIGATGAYNNAKHTRDAVGETLLVINNLLSMIGKPGSVDEERLGEL
EQSINSARGQVNLQLQPRLQDLEGKEASQRTRLTGLNLDIDMILDDIRNLEDIHANIPKG
CFNSPPIERP
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttgatttacttaattcccgttcgattttctgtgacaatgatgagcagttgg
atatttctgtgtggactttctctttgtacctggtcgtctatccaaggaacctacagatat
ggaggatcagacatctgtaaatgcaatggaaagtcacgttattgcttgcctgactctggg
ggcctccattgtgtggactgccaagacaacactgagggaaggcattgtgagaggtgcaag
gagggattccaccaccagagggcaggagacagttgtgtgccgtgtaactgcagctctaaa
ggttctgtaggcgcacactgtgacagtagaggacgctgcagctgtagagcgggaacacag
ggggagaaatgtgaccggtgtcagaatggaacacctatcagctcaaatggctgtgctgct
aatggtggccagctcactgacaactcagtgacagctcaatctctaccttgcttttgctat
ggacactcgactgagtgctccacagccaagggatactcagttcacacagttacctcaacc
ttcgacgatggaacagaggggtggcgagctgccactgttcacggtgtgaccccatctcaa
gtccacttccactggtcccccactcatcgtgacattgaggtcatctccaaagacatcctc
cctgtttacctctatgcccctgactcttacctgggtaaccaggagctgagctacggtcag
aacctgtccttctccctgaggctggaccgaggggttcgccacccgtccatggctgatgtg
gtgctggagggatctgggctgagcgtggcagcttccctgggagacctgaggaccatcgtt
cccagtggacagaagattacttacacattcagactggatgagcaacagggcagtgaatgg
aggccccacctttcatctttccagtttcaaacactcctccacaatctgactgacattaaa
atccgtgggacatttggagaaaatgggcgtggttaccttgacgacgtgcgcatggagtct
gcccgtcgaggtgccgggtccccagctacatgggtacagaaatgtagctgcccagtggga
tatgagggccagttctgtgagaagtgtgctgcagggtataaaagaagtttgccaagcaaa
ggtccatacagctcctgtgagccctgcagctgtagaggaggaagctgtgactccgaaaca
ggagactgttactctgcagatgagacccctggtcgccagatctgcccgccagggtactat
aatgatcctgcccagccacagtcttgtcagaagtgtccctgtcccaatggaggtgcctgc
tctgtgagcccaggttccctggaggtcaagtgtgacctctgtccacctggcaccactggc
tcacattgccacacctgccaggatggtttctatggcgatcccttgggtgaagatggcatc
cagaggccttgtcggcgctgccagtgcaacggacacatggacccgaacactgtccgtagt
tgtgacccacagacagggcagtgcctgaaatgcctaaattatgccactggcttcttctgt
gagagctgtctggagggctatcaccacagcatgccatcagaggcatgcaaaccttgtggc
tgcaattctcagggctctctgtacaacaaatgcagtgaccagggccagtgttcttgcaga
gaaggctttgagggtctgaagtgccagcgttccgcgtgtccctcctgcttcaaccttgtc
aagactgagatggaggggtatagtcgtaaactacgggagatagaaactctgtttacgggc
atggagagtggcagtctgccagttaacgacgcccagatggagaaagccatcagaacagca
gaggatatagtcacagacctgcagagaaatgcacagacactctctgaatcagagaaagac
ttacaggcccggctctcagacatcagtgcaacccagctgagtgaaggcagagacatccag
gcgatctccaacaccgttgacaacatcaagctgcaggaccagaagtaccaacgacaggta
tctgatgtccagacactcatcagtgatgtgcggcgcaaacttgaagaggcaagattcaac
atcaaacaagctgaattccccttaggtgatgcaggggtgggcacggataccctctcttct
ctggttcagagagcaacagacctggctgaaaaacagcggagcaaatcggagacaatggag
aagaccgctaacggtgcccttgcaaagtccgagaagtccctggcactcatgagatcggtc
atgacaggggaaaacaagatcaaggagcttatcagtgatcttaaaaccaagtatgatgag
aactcagcccaggtgaaggccatggagagcctggctactcgcctgagcagctctgcccga
gatgagagcaggatggcaactggcactctggagcagatagcctccctggagccgggaatc
cctcgtcctctcaagaaggacattgacagtgtgttggctaaattggatggcctgagagaa
cgggtggagaagaacctaacagcgtaccaggcactgcaagaggacacccaggaggacaaa
gccgcagtagaggatcttctggcccaggggaaggcagctcaacagaaatatgacaagctt
cttggcagagcaaatcatgcgaaggctgacacagaactggccctgaaggatatcacagat
aatattgatggggtggataatgtactggagatgctaagagggtttgatggccagatcaac
aagaacaaggcattggccgacgaggccataaagaaactccctggcatcaacgccaccatt
catcaagctgttggcaacaactcagagaccctattcatcataggcagtgtgtctggagac
tacaatgatgcactgggcactgtcagcagcctggaagctgtggtctctcgactggaggga
atgtccggctctttaccagttcctcctgctggtctgttgaaggacgccaccaagctgaaa
gaggacgtgcagggtctgcagaagcaggcagtggccactgtggccaaagtggcagcagag
aaggctaacgctgagatacagaaagacagagcagcagaggcttcaattggagcaactggt
gcttacaacaatgccaagcacaccagagacgctgttggagaaacactcctggtcatcaat
aaccttctgagcatgatcggtaaacctggcagtgtggatgaggagaggctaggggagttg
gagcagtccatcaacagcgctcgtggccaggtcaacctacagcttcagcctcgactgcag
gacctagaagggaaggaggccagtcagaggaccaggttgactggcctcaacctagatatc
gatatgatcctggacgacatcaggaacttagaggacatacacgcgaacatccctaagggc
tgcttcaattccccacctattgagagaccttaa
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