Oncorhynchus masou masou (cherry salmon): 135558689
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Entry
135558689 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04115
p53 signaling pathway
omm04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135558689
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135558689
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135558689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135558689
NCBI-ProteinID:
XP_064848799
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Position
17:21343639..21353716
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AA seq
733 aa
AA seq
DB search
MSSNRQQQTSGGTGPGTSSSSTGGTTNANGATSVGGNVSTNVNNSSNVVPSRTLATTGDG
LLVPAAAVQSPISLATLSRPSSSSSGTSRKRPLHQAPLYNGLLNSYEDKSNDFVCPICFE
MIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSD
EKRLKMDHPNGSRWQVFQDVLGTDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILM
EFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPMSDMDRNLDSTVPNFEAPSP
APSSLMDSTEYPSQPPGFGGTSQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNRMTRL
TDDSRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIA
GVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWD
GFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVC
CVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTD
SQLKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFK
FDTVKSVLDKDKKEDDTNEFVSAVCWRAMPDGESNVLIAANSQGTIKVCFVIVFYSAQFP
NSDELKLTSVEDS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaccgtcaacagcaaactagcggtggaacggggcctgggacaagtagcagc
agtaccggtggcactaccaatgctaacggtgctaccagcgtaggcggtaacgtcagtacg
aatgtgaataattcttcaaatgttgtgccctcacggactctggctacaactggcgatggg
ttgctcgtacctgccgcggctgtccagtctccaataagcttagccacacttagcagaccc
agttcatcctcttctggcaccagcagaaaacgtcctctccaccaagcacctctctacaat
ggtctcttgaattcctacgaagataaaagcaacgattttgtgtgcccgatctgttttgaa
atgattgaggaggcacacatgacaaaatgtggacacagtttctgttacaagtgcattcgc
cagagtttggaggacagcaataggtgcccaaaatgtaactacatcattgacaacgtggat
cagctctatccaaactttcttgtcaatgaactcattctcaaacaaaaacagagatcagat
gaaaaacggctgaagatggaccatccgaatgggtcgagatggcaagtgtttcaagacgtc
ctgggcacagaccaagaaaacctagatcttgctaatgtcaacttaatgctggaactcctt
gtacagaaaaagaaacagctggaagcggaatcacaagctgctcaacgtcagatcttaatg
gaattcctcaaagaagcaagaagaaataaaagagagcaactggagcagttgcagaaggag
ctaaactttttggaggaggatatcaagcgtgttgaggaaatgagtggactgtactcacca
atgagtgacatggatcgtaacttggacagcactgtgcccaatttcgaggctccatcacct
gcacctagtagtcttatggattcgacagagtatccgagtcaaccaccaggttttggtgga
acttcccagggtaagaggcaaacgtggtacaacagtactctggcttcacgtagaaagagg
ctcacagcgcactttgaagatctggagcaatgctacttctctaaccggatgaccagatta
acagatgacagcaggaacctaaatcaactggatgatttcatggagtgtctctccaagttc
acacggtacaactctgtgcggccgttggcgaccctttcttatgctagtgatctctacaac
ggctccagtattgtctctagcattgaatttgatcgtgactgtgattactttgccatcgct
ggcgtcaccaagaaaatcaaggtgtttgagtatggaacagtgatccaggatgctgtggac
attcattaccctgtcaatgaaatgacgtgcaactccaaaatcagctgtatcagctggagc
agctaccacaagaatctgttggctagcagcgactacgagggaacagtcatcctgtgggat
ggtttcactggccaaaggtcaaaggtctatcaggagcatgagaaaagatgttggagtgtc
gatttcaacctcatggatcccaagcttctagcctctggttctgatgatgcgaaagtgaag
ttatggtctaccaaccttgacaattcagtcgccagcatcgaggccaaagcaaatgtgtgc
tgtgtaaagttcagtcccacatcgaggtatcaccttgcttttggatgtgcggaccactgt
gtccactactacgacctccgcaacactaaacagcccatcatggtgttcaaaggccacagg
aaagctgtgtcctatgctaagtttgtcaacggagaggaaattgtatctgcctcaacagac
agccagctaaagctgtggaatgtaaacaagccccactgcttgcgctcattcaagggccac
atcaatgagaagaactttgttggcctcgcctccaatggggactatgttgcgtgtggaagt
gagaacaactcactttatctctactacaaggggctgtccaagacactgctgacgttcaag
tttgacactgtgaagagtgtgttggataaagacaagaaagaggatgacaccaatgagttt
gtcagcgccgtatgctggagagctatgcctgacggggagtccaatgtgctgattgctgca
aacagtcaaggaacaatcaaggtttgttttgtgattgtattttactcagcccagttcccc
aatagtgatgaacttaagcttacgagtgttgaagacagctga
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