Oncorhynchus masou masou (cherry salmon): 135558778
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Entry
135558778 CDS
T10723
Name
(RefSeq) protein SSXT-like isoform X1
KO
K15623
protein SSXT
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135558778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135558778
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135558778
GBAF(ncBAF) complex
135558778
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
135558778
NCBI-ProteinID:
XP_064848974
LinkDB
All DBs
Position
17:complement(26877418..26904146)
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AA seq
415 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNPSGAPGPQPPHGHNMP
PEGMVSGGPTAPHMQNQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGAMNMPPSSHGSMG
GYNHAVPSSQGMPAQGQMNMTQGQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPG
GGGQHYQGQQNPMGMMGQVNPGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAG
QGASEERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPQQQGYPPQQQYPGQQGYPGQQQG
YGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQGQYGNYQQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacagacaacgtggaaagggtgatataacacccgctgga
attcaaaagttactggatgagaacaatcagctgattcaatgtataatggatttccagagt
aaaggaaagaccgcagaatgttcacagtaccaacaaatgctccacagaaatttggtttac
ctggccacgatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcctccagaggtaaagcttgaaccacccactcagaacatgcccatgggccct
ggtgggatgaacccgagtggagcgcctggcccccagcccccccacggacacaacatgccc
ccggagggcatggtcagcggcggccccactgccccacacatgcagaaccagatgaacgga
cagatgcctgggcccaatcacatgcccatgcagggccccgggcctggccccaaccagcct
cccaacatgcccggaagtggcgccatgaacatgccccccagcagccacggttccatgggc
ggctacaaccacgctgtgccctcgtctcagggcatgcctgcccagggccagatgaacatg
acccagggacagggacccatgggcaactacggcccccggcccaacatgaacatgcagcct
aaccaaggccccatgatgcaccagcagcctccctcccagcagtacaacatgccccctggg
ggtggcgggcagcactaccagggccagcagaatcccatgggcatgatgggtcaggtcaac
ccaggcaaccatgtcatggggcagaggcccatgcccccttacagacccccacagcaagga
ccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcacgcagga
cagggcgcttcagaagagcgagacccagcagccaaccaacagtccccctatgaaaaagat
catggaaacgcccagtatggccagcagcaggaggcctaccagcaaggtcctcaacagcag
ggctaccccccacagcagcagtaccccggacagcagggctatcctggacagcaacagggt
tatggtccatcccagggagctccaggccagtaccctcagggttacccccagggccagggg
cagcagtacggggcctaccggggcccccagcccggcccccctcaggcccagcaacaacgc
ccatacccaggctacgaccagggtcaatatggaaattaccagcaatga
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