Oncorhynchus masou masou (cherry salmon): 135558809
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Entry
135558809 CDS
T10723
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135558809 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135558809 (exosc4)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135558809 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
135558809 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135558809
NCBI-ProteinID:
XP_064849021
LinkDB
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Position
17:complement(28983123..28984754)
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AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG
SRSKTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQ
IDIYVKILQSDGGNYSACVNAATLAVVDAGIPMRDYVCACTAGFVDETPLADLCHAEESG
GGTSLALALLPRGGHIALLQMDARLHQDHLETLMEAAMTACKGVSKVLDEVVRQHLQEVS
ALTGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctggagttattgtcagatcaaggatatcgtcttgatggaagaaaagctgct
gaactgcggaaagtacaagctcgtatgggtgtatttgcccaagctgacgggtctgcttac
atagaacagggaaataccaaagcgctggcagttgtgtatggtcctcatgaagtgcgaggc
tcccgcagcaagaccctccatgaccgtgctgtcatcaactgccaatacagcatggctacc
ttcagtacagcggagaggaagagaagaccccacggggatcgcaagtccacagagatgagc
cttcacctcaagcagactttcgaggcagcagtgttgactaatctgtacccacgctctcaa
atagacatttatgtcaagatcttgcagtcagatggagggaactacagcgcgtgtgtgaac
gccgctactctggcagtagtcgatgcgggcatccccatgcgtgactatgtgtgtgcctgc
actgcaggctttgtggatgagaccccattggcagacctgtgccatgctgaagagagtgga
gggggcacatcactggccctggcattgttgcctcgtggcgggcacattgccctgctacag
atggacgcccgactccaccaggaccacctagagacactgatggaggcggcaatgacggcc
tgtaagggcgtcagcaaagtgttggacgaggtggtgaggcagcatctacaggaggtgtct
gcgctgactggagagtga
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