Oncorhynchus masou masou (cherry salmon): 135558834
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Entry
135558834 CDS
T10723
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135558834 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135558834 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135558834 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
omm03029
]
135558834 (rb1cc1)
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135558834 (rb1cc1)
Membrane trafficking [BR:
omm04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135558834 (rb1cc1)
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135558834 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
135558834
NCBI-ProteinID:
XP_064849070
LinkDB
All DBs
Position
17:complement(30188017..30207564)
Genome browser
AA seq
1634 aa
AA seq
DB search
MKLYVFQVNNGSTLAFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYINYQQ
EFEDIKLKLTKLGTAVSVMANIPLLECLTRHSYKECIEKSCSTPNKYSDETEEEKSTDSV
LCPSPTKLPASFSAPGAGDSPDTAETQESSEMTDSSGLRAALQEADSPERANPLSFNVTL
LDWINVQDRPNDVESVVRKCFDSINRLDPRVIQPFLAECRDTIAKLDNQNMKAIKGLEDR
LYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIMLTNHR
KLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRVVDA
LSTVPQMYCLAVVEVVRRKLFIGHYREWACALVKDGKRLYETEKYKRETFGKLFRKCFLR
NRLFRGLDSWPPTSFCTRKPRKFDFELPDISLGDLQYLKTCCPTEVQPFLRVPTLCDFEP
LHLHLEMLQQLVLASQAASVDEMSQTITDLLSEQRGSCSQSAQRSTAAVTPQSDSTPGTS
SPKTPSSLSLPGPPCQPLPGPTTLEDLSPDSIDAQTFDFETIGHPNMDPVLQQAGSLDLD
SLAESPESDFLSAVNEFVIENSPTPISDPTSPEMMVESLYSSVINAIDSKRMHDTTTLER
ENSKVATLNLSIEKYRSAAEESQANLRSVKDDLYRFRGLVLKEQRDFGFALKTMTIEVRN
MVDTIRKREEEELREQHQAELLSVQQDHEKQLQTLTEENRVNRNIVKDVQRAMLELEGLL
ERKEKELTQLEAERRCWTEAESGHIQSLSVLEHKISDQAQEVLTVAASRDSLYSQLETLH
IEIERGQQKIRLELEGAEQVHLQELEERMRQQHQAQLDTLARENQEAMECLAMVNRVKLS
EVADRHAASLTERDGQLRDLEARATELADLRCKLEVELALKESEMEVVRLLYEEAKQGQQ
EANVRKATVEAETQSFNEQLVQVNGQLHAKNEEYEKGLAELRTLMRMEKDQCISELVGRH
EEERNQRRSELTALQQQAQDAGRSHAEQLQNLQLDLDLQTAALRNDKEVQQRSFEEQEQQ
LRTVICDLQTENDLLTKRLEQDTQAAQERFEKEESLKAAVPDAFKDFEQQKEEMEKRLLD
KIRHLENELRERQSSEREAGLSKVQTESRGSETGAPLSLDSALQERLQQETASLHTQLEL
LERRKDEEMQNLKTSLIAEQQTNFNTVLMREKLKKEQIISELTEELRKVTQQQEKDKGLI
EMLSEDRAIVMQEKKQLEEDLNRLRSTALVSSAYYSPNPLALEPTGAGARLGSGACPGPG
TEVGAGACSSELFPDPDRLASVAATREDDRVDSAVEASMVTVHDNILMMSEEKQRILLLE
RTLHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTV
GPTLYFLHSESLTALDLKPDPMFTSASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGT
KFYRVKAVPWNKKV
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggaagcactctggcatttgacacagagctc
gctgtccaaacagtgttggacctcaaacatgccatccaggtcaaatacaagattgcaacc
cagcatcaagttctggttgtcaatggaggggagtgtatggttgcagagaggagagtctgc
agctacagtgccggcactgacaccaaccccatattcctgttcaacaaagagatgattttg
tgtgaccgggctccgacgatccctaaaaccacattctctattgagaatgagatggagctc
aaggtggaggagtcactaatgatgccagcagtctttcacaccgttgcctcacgaacacaa
cttgctgtggaaatgtttgaagtcgccaagaaactttgctctttctgcgaacgactggtt
cacgatgaacacctccaacaccaaggttgggctgctatcatggcaaacctggatgactgc
accctgtcttatcagaagctactgtggaaatttgacacggcgtacattaattatcaacaa
gaatttgaggatatcaaattgaaactgacaaaactggggacagcagtttcagtcatggcc
aatatccccctgctggagtgtctgacccgccacagctacaaagaatgcatagagaagtcc
tgctccactccaaacaagtactctgacgagaccgaggaggagaagtccaccgactcggtg
ctctgcccctcccccaccaagctacctgcatcgttctctgctccgggggcgggggactcg
cccgacaccgccgaaacccaggaaagcagtgagatgacggacagtagtgggctgagggca
gccctgcaagaggcagactctccagagagggccaaccccctgtccttcaacgtcacactg
ctggactggattaatgttcaagaccggcccaatgacgtggaatcagtcgtgaggaaatgc
tttgactccatcaataggctcgacccacgggtcattcaaccattcttagcggaatgtcga
gacacgattgccaaactggataatcagaacatgaaagccatcaaaggacttgaggacagg
ctatacgctctagaccaaatgatagcgagctgtaaaaagttggtcaatgaacagaaggaa
cttgctcagggctttctggccaatcagaagcgtgctgagaacctgaaggatacgtccgtg
ctgcctgacctgtgtctcagtcacgccaatcagctgatgatcatgctgaccaaccacagg
aagctgctggacatcaaacagaagtgcaccactgccaaacaggagctggcgaacaaccta
caagttcgtctcaaatggtgctgctacgtgatgctgcacgcggaccaggatggggagaag
ctgcaggccctgctgaggctgctgaccgagctgatggagagagtccgtgtggtggacgcc
ctcagcaccgtgcctcagatgtactgcctggccgtggtggaggtggttcgcaggaagctc
ttcatcggccactacagagagtgggcctgtgctctcgtgaaggatggaaagcgtctctat
gagaccgagaagtataaaagggaaacgtttggcaagttgttcaggaaatgttttctccga
aatcggttgtttagaggacttgactcatggccccccacttcattttgcacaagaaagccc
agaaagtttgactttgagcttcccgatatttcccttggtgacctgcagtacttaaagacc
tgttgtcctacagaggtgcagcctttcctcagggttccaacactgtgtgattttgagcct
ttgcatctgcatttggagatgcttcaacagttggtccttgcttctcaagctgcaagtgtg
gatgagatgtctcaaactatcaccgatttactcagcgaacaaagggggtcgtgcagccag
agtgctcagagatccacagcagcggtgaccccacagtccgacagcaccccagggacttcc
tcccccaagaccccctcctctctcagtctcccggggcccccctgccagcccctccctggc
cccaccaccctggaggacctgtccccggacagcatcgatgcccaaacctttgacttcgag
acaattggccaccccaacatggaccccgtcctgcagcaggccggctccctggacctggac
tccctggctgagagccccgagtcagacttcttgtcggcggtcaacgagtttgtgatcgaa
aactcgcccacccccatcagcgaccccaccagcccagagatgatggtggagtcgctgtac
tcgtcggtcatcaacgccatcgacagcaagcgcatgcatgacaccaccacattagagagg
gaaaactccaaggtggctacgctgaatctgagcatcgagaaataccgctctgctgccgag
gagtcccaggccaacttgcggagcgtcaaggatgacctgtaccgcttcagaggcctggtg
ctgaaggagcagcgagactttggcttcgccctgaagaccatgaccattgaggtgcgcaac
atggtggacaccatccgtaagagggaggaggaggagctgagagagcagcaccaggccgag
ctcctctctgtgcagcaggaccacgagaagcaacttcagaccctgacggaggagaaccgg
gtcaaccggaacatcgtgaaagacgtgcagcgggccatgctggagctggaggggctgctg
gagcgcaaggagaaggagctgactcagctcgaggctgagaggcggtgctggaccgaggcg
gagagcgggcacattcagagcctcagtgtcctggagcacaaaatcagcgatcaggcccaa
gaggtgctgactgtggctgcttccagagactccctgtacagccagttggagacactccac
attgagattgagcgcggccagcagaagatccgcctggagctggagggggccgagcaggtc
cacctgcaggaactggaggagaggatgaggcagcagcatcaggcccagctagacaccctg
gcccgggagaaccaggaggcaatggagtgcctggcaatggtgaacagggtcaagctgagt
gaggtcgcagaccgccacgccgcctctctgacagagagggacggccagctgagggatctg
gaggcccgggcaaccgagctggctgacctacgctgcaagctggaggtggagctggccctg
aaggagtcagagatggaagttgtgaggcttctctacgaggaggccaagcaggggcagcag
gaagccaacgtgaggaaggctactgtagaggcagagacccagtccttcaacgaacagcta
gttcaggtcaacgggcagctgcacgctaagaacgaagagtacgagaagggcctggctgag
ctccggacactgatgcgcatggagaaagaccagtgcatctcggagctggtgggcaggcac
gaggaagagaggaaccagcgccgcagcgagctgaccgccttgcagcagcaggcccaggac
gcaggaaggagccatgcagaacagctgcagaacctccaactagacctcgacctgcagacg
gcagcactgcgcaacgataaggaagtgcagcagaggagttttgaggagcaggagcaacaa
ttgaggactgttatctgcgatttgcagacagaaaatgatctgctcaccaaaagattagag
caggacacccaagcagcccaggaacgttttgagaaagaggagtccttgaaggctgcagta
ccagatgccttcaaagactttgagcaacaaaaggaggagatggagaaaagacttctagac
aaaattagacatcttgaaaatgagcttcgggaaagacaatcctcagaaagagaggcgggg
ttgtcgaaggtgcagacagagagtcggggatccgaaacaggagctcctctctccctggac
tccgccttgcaggagcgtctgcagcaggagacggcctccctgcacacccagctggagctc
ctggagaggaggaaggacgaggagatgcagaacctcaagacctccctcatcgcagaacaa
cagactaacttcaacactgttctgatgagagagaagctgaaaaaggaacagatcatcagt
gagctcacagaggagctgcggaaggttacccagcagcaggagaaggacaaaggcctgata
gagatgctgtctgaggaccgggccatcgtcatgcaggagaagaagcagttggaggaggat
ctgaaccggctgcgcagcacagccctggtgtcctctgcctactacagccctaacccctta
gctctagagcccactggagccggggccagacttggatctggagcatgtcctggacctggg
actgaggttggggccggagcctgctcctcagagctcttccctgacccagacagactggcc
tctgtggctgccaccagagaggacgacagagtggactcggctgtggaggccagcatggtg
actgtgcacgataacatcctgatgatgtcggaggagaaacagcggatactgttacttgag
aggactttacacatgaaggaagaagaaaacaagcgcctcagtcaaagactgatgtctcaa
agcatgtcctcggtgtcgtcacggcattctgagaaaattgccatccgagatttccaggtt
ggcgacttagttctgatcatcctcgatgaaaggcatgacaactatgtgctattcaccgtg
ggtcccaccctgtacttcctccactctgagtccctcacggccctggacctcaaaccagat
cctatgtttacttcagcatcaggagcctcaagacggccgtgggttctcggaaaagttatg
gagaaagaatattgccaggcgaaaaaggctcaaaaccggttcaaagttcctttgggcacc
aagttctacagggtgaaagctgttccgtggaacaagaaagtatag
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integrated database retrieval system
