Oncorhynchus masou masou (cherry salmon): 135558938
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Entry
135558938 CDS
T10723
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135558938
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135558938
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135558938
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135558938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135558938
NCBI-ProteinID:
XP_064849244
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Position
17:complement(35349022..35369780)
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AA seq
503 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTSRN
RCQHCRLQKCLVLGMSRDAVKFGRMSKKQRDSLYAEVQKHQKNQECLNQGLPLSREDVAG
GESKGDRHGELSRSYSSGGSSSTLSDLDDIAALPKLFDLPLTPQEAHEYCSLDLQEDHGG
STGNTSNSSSPSSSSPISSNQNSPQQNLLDVTDANGIKHEYQMLSHTHVLLAHTHATLLE
TLPDDCTLMDIERITQSVVKSHLETSQYSSDELKRLTYNRMQYSPEETRNFQCESAESVW
QQCAHHITNSIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNATTNTMF
FNGKFASAQLFKALGCDDLVSAVFDLAKGLSRLQLTDEEMALFSATCLLSPDRPWLADSQ
KVQKLQAKVYLALQHSLHMSGAADEKLDQMVSKLPIMKSICNLHIDKLEFFRLVHPETAY
SFPPLYREVFGSEISLPDSTNNS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggaatc
cactatggagttattacctgtgaaggctgcaaggggttcttccgccgcagccagcagaac
aatgccatgtactcttgttcccgccagaggaactgtcttattgaccgaaccagccgcaac
cgctgccaacattgcagactgcagaagtgtctggtgttaggcatgagccgggacgcggtg
aagtttggccgtatgtctaagaagcagcgcgacagcctgtacgctgaggtccagaagcac
cagaagaaccaggagtgtctgaaccagggtctgccactgtccagggaagacgtggctggg
ggagaaagcaagggggacaggcacggggagctcagtcgctcctacagcagcgggggatcc
agctccaccctgagtgacctggatgacatcgcagcgctccccaaactgtttgacctcccc
ttgaccccacaggaggcccacgagtactgcagcctggacctgcaagaagaccacggcgga
agcactgggaacacctccaattcttcatcaccatcatcatcctcgcccatttcatccaat
cagaattctccccagcaaaatctactggatgtcaccgacgccaatgggatcaaacacgag
taccagatgttgtcgcacacacacgtgctcctggcacacacgcacgccacactgctagag
acactgcctgatgactgcactcttatggatatagagcgtatcacccagagtgtggtcaag
tcccacttggagacgagtcagtacagctctgacgaactgaagaggctgacatacaatcgg
atgcagtactcacctgaggagactcgcaacttccagtgcgagtctgcagagtctgtgtgg
cagcaatgtgcccaccacatcaccaattccatccaatacgtggtggagtttgccaaacgc
attacaggcttcatggacctgtgtcagaatgaccagatcattctgctcaaagcaggctgt
ctggaggtgctgttgattaggatgtgcagggcatttaacgccaccaccaacaccatgttc
tttaatggcaaatttgcctctgcccagctcttcaaagccctcggttgcgatgacctggtc
agtgccgtgtttgacctggctaaagggctctcccgcctgcagctgaccgatgaggagatg
gctctgttcagtgccacttgcttgctgtccccagaccgaccatggttagccgacagccag
aaggtccagaagctacaggcgaaggtctacctggctctgcaacacagtctgcacatgagc
ggggctgccgacgagaagctagaccagatggtatccaagctgccgataatgaagtccatc
tgcaatctccacatcgacaagctggagttctttcgtctggtccaccccgagaccgcatac
agcttcccaccactctaccgagaagtgttcgggagtgagatctctctccccgactctaca
aacaactcctag
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