Oncorhynchus masou masou (cherry salmon): 135558988
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Entry
135558988 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
omm03015
mRNA surveillance pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135558988
09122 Translation
03013 Nucleocytoplasmic transport
135558988
03015 mRNA surveillance pathway
135558988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135558988
03041 Spliceosome [BR:
omm03041
]
135558988
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135558988
Spliceosome [BR:
omm03041
]
Complex C
Other components
EJC/TREX
135558988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
135558988
NCBI-ProteinID:
XP_064849335
LinkDB
All DBs
Position
17:37968921..37998338
Genome browser
AA seq
2055 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQRTSHHH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEKEAREAVEDDDTDQEDHTQGNNSSA
CAAPDQDDVPVLVGQHKPLGPSEGEGLAGPANEGEGHRAKDGHVSGPPASTSPTSAPAAV
ASLSVCVADGEQRPERVPTSSQVPADSDDDSDGGDEDGEDEDWDRGARRRNLGEPPRGQL
TRARSEGSRQPPQHTPLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGELPARQRTS
STSSSGSSSSGSRSSSPEPQSNAERKPGPLTLLARKMASEGAFSGVGWHGRGEAERQDNN
AATATIFPGRGPQEGTVSAITHTANAAASLPFPSLVPVTNQGVLGGHLSHSQVPVSVLRP
TIMEERDSAWQQENKERELQAESEREKALEQERLRAVELERQRIFEQQHAMEQERERALE
REREEREKALEAERMESERALERERAQALEQEREEREKALAEEREKSVARERALELEKAV
ELERQRAMEREQALQQEREERERAKAFEREQVLEQERVETARALEQERVEMEKALERERQ
ERERALEREQLEREKALEMERIEREKALEQERVEKEKALELVRQKALKREQEERQKALEL
ERQKALELERQKALELERQKALELERQEALERERQEALERERQEALELERQKALELERQE
ALERERQEALERERQEALERERQEALERERQEALERERQEALERERQEALERERQEALER
ERQEALERERQEALERERQEALERERQEARERQEALELERQTALELERQTALELERQTAL
KREQERQTALELERQTALELERQTALELERQTALELERQTALELERQTALKREQEERQKA
LELERQKALELERQKALELERQKALELERQKALELERQKALELERQKALELERQTALELE
RQTALELERQKALELERQKALELERQKALELERQKALELERQKALELERQKALELERQKA
LELERQKALELERQKALELERQKALVREQEREKALEQERVEKEKALELERQKALERELEE
REKDREEKARALHQERIEREKERAMEKERVERGKALEREREEKERALEQKALQREKEERE
SVLEQDKERAMVAERESHLPPWKRGREIGLTPLPTPPLSTGAGRKAATEEGGEPHVPSLP
QTASRDNQPVESGTPLSPQSSFKKFRFLRDPPVLSPSCSASLVIKRPRTFSDSPHTQASA
LQSPRKPGEQEQESTLQGSKLSSGQAASQMPARKGFLVSGPTAADTSDTTGPETPVIGTL
GKSPEEEKAKEHVLADKETNKQEVGERARGVKRVDAGNVPLSPAESVVPPSPPPEEGNVD
RGRERSQKKQEKRGRRASSSSDSSDSDSGSSSSRSSGSSSSSQGKTLTTPSGRKPEKPQT
KTISQDKETVSQLEESPKAPQRKNRVPGEKDMTIDGARHGKKSFVGIPAGQDNEQKDSEG
EEEMTDTTSEVKEAAMAEPERAPECSEESLTPKAFTARRISLSSSKASPGVVSAEGEAES
GAGPGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIRLSPGQEAVVDLHPEEVHLSGGE
EDREQGEQDFKIRRTVTQVVLSETQENGPKESKRSENMENREDGVEVKSDREEKMDDSFQ
RDSMETQSPSPPIHDMEMNTVTPSDTLIRRSISQQKSGVSITIDDPVRTAKQPSPPRGKV
SNIVHLSNLVRPFTLGQLKELLSRTGTVLEDGFWIDKIKSHCYVTYSSAEEAVATRAALH
GVKWPQSNPKFLCVDFSQQEELDFHRGLPPPGGAGEEERGASSVPGRGRGAALPPLLPER
GQWAEREREMERRERTRAEREWDRDKVRDFGPGKPGEDAGPRRSRSRERKRKERKMDKKE
KAAEEAPAKLLDDLFNKTKAAPCIYWLPLTEEQFTQREVARQERRKEREKRRKEQQEEEE
KKREEERKERIKASGERGEGDRDRERDRERGKDRDRDREGDKHRESSHRRPGGNSAGVGR
RSRSRSDPPPRDRRR
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacactggacgggaggccgctacaatctctacgggtggcg
gatttgaaagctgctttggaggagcgggggcttcctaaaagcggacagaaaaatgctctc
attaagaggctcaaaggggctctcatgctggagaacctccagagaacctcacaccatcac
ataggactgcagccaaactctcagattggtgaagagatgagccagaatagcttcattaag
cagtatctggcaaaacagcaggagctcttgaggcagcgtcttgagaaagaggcccgggaa
gcagtcgaagatgatgatacagaccaagaggaccacacacagggcaataacagctctgcc
tgtgctgccccagaccaggatgacgtacccgtgttggttggccagcacaagccacttggc
ccctccgagggagagggactagcaggcccagcaaacgagggagagggacacagggccaaa
gacggccatgtgtctggtccacctgcctctacctctcctacctctgcccctgctgccgtt
gcttctctgtctgtgtgtgtagctgatggtgagcagcgaccggagagagtcccaacctct
agccaagtcccagcagatagcgatgatgacagcgacggaggtgacgaggatggcgaggat
gaggactgggatagaggtgccaggaggaggaatctaggagagccaccaagaggccagcta
acaagagcgaggtctgaaggatcccgccaacccccacagcacacccccctgttgtctccg
cagcttcgacagcctacccctcccccgtcccctcccccagagttatcattcccactgcct
gatacccctaaacaaagcccccctagtccaggtgagctcccggctaggcagcgtacttcc
agtacctccagctctggctcctctagcagtggcagtcgtagtagcagtccagaaccacaa
agcaacgcagagcgcaagcctggcccactgaccctgctggcacgcaagatggcatcagaa
ggcgccttctctggagttgggtggcatggacgtggggaggcagaaaggcaggacaacaat
gctgcaactgcaacaatatttcctggtagaggtcctcaagagggcacagtgtctgccatc
acccacacagccaatgctgcagccagtttgcccttccccagtctggttccagttaccaac
cagggtgtccttggaggccatctatcccacagtcaagttcctgtgagtgtgcttaggccc
actataatggaagagagagattctgcatggcaacaagaaaacaaggaaagggagctgcag
gcagagagcgaaagagaaaaggcccttgagcaagagagacttagagccgtggagctggaa
agacagagaatatttgagcaacagcatgccatggagcaagagagggaaagagctttggag
cgagagagggaggagagggagaaagccttggaggcagaaaggatggagagtgaaagagct
ttagagcgagagagagcacaagctcttgaacaagagcgggaggaaagagagaaagctttg
gcagaagagagagagaagtctgtggcaagagagagggcccttgagcttgagaaggctgtg
gagttagaaaggcagagagccatggaacgagagcaagctttgcagcaagagagagaggag
agggaaagagctaaagcttttgagcgggagcaagttcttgaacaagaaagggtggagaca
gcgagagcgttggagcaagaaagggtggagatggagaaagccttggagcgagagagacag
gaaagagagagagccttggagcgagaacagttggagagggagaaagcattggagatggag
cgtatagagagggaaaaggctttggagcaagagcgagttgagaaggagaaagctttggag
ctagtgaggcagaaagctttgaagcgggaacaggaggagaggcagaaagcgctggagcta
gagaggcagaaagcgctggagctagagaggcagaaagcgctggagctagagaggcagaaa
gcgctggagctagagaggcaggaagcgctggagcgagagaggcaggaagcgctggagcga
gagaggcaggaagcgctggagctagagaggcagaaagcgctggagctagagaggcaggaa
gcgctggagcgagagaggcaggaagcgctggagcgagagaggcaggaagcgctggagcga
gagaggcaggaagcgctggagcgagagaggcaggaagcgctggagcgagagaggcaggaa
gcgctggagcgagagaggcaggaagcgctggagcgagagaggcaggaagcgctggagcga
gagaggcaggaagcgctggagcgagagaggcaggaagcgctggagcgagagaggcaggaa
gcgctggagcgagagaggcaggaagcgcgggagaggcaagaagcgctggagctggagagg
cagacagcgctggagctagagaggcagacagcgctggagctagagaggcagacagctttg
aagcgggaacaggagaggcagacagcgctggagctagagaggcagacagcgctggagcta
gagaggcagacagcgctggagctagagaggcagacagcgctggagctagagaggcagaca
gcgctggagctagagaggcagacagctttgaagcgggaacaggaggagaggcagaaagcg
ctggagctcgagaggcagaaggcgctggagctcgagaggcagaaggcgctggagctcgag
aggcagaaggcgctggagctcgagaggcagaaggcgctggagctcgagaggcagaaggcg
ctggagctcgagaggcagaaggcgctggagctcgagaggcagactgcgctggagctcgag
aggcagactgcgctggagctcgagaggcagaaggcgctggagctcgagaggcagaaggcg
ctggagctcgagaggcagaaggcgctggagctcgagaggcagaaggcgctggagctcgag
aggcagaaggcgctggagctcgagaggcagaaggcgctggagctcgagaggcagaaggcg
ctggagctcgagaggcagaaggcgctggagctcgagaggcagaaggcgctggagctcgag
aggcagaaggcgctggtgcgagaacaggagagggagaaagcgctggagcaagagcgagtt
gagaaggagaaagctttggagctagagaggcagaaagctttagagcgggaactggaggag
agggagaaagatagggaggagaaggcaagggctttgcaccaagaaagaattgaaagggag
aaagaaagagccatggagaaagaaagagtggagaggggaaaagctttggaacgtgaaaga
gaggagaaggagagggctttagaacagaaggccctgcagagagaaaaagaagagagggag
agtgttttggaacaagataaggaaagggctatggtggctgagagggagagtcatcttcct
ccatggaaacgtggtcgtgagattggtcttacccccctgcccactcctcccctctccaca
ggagcaggtagaaaggcggcaacagaggagggtggggagccccacgtgccatccctaccc
caaacagcatcgagagacaaccagccagttgaatctggtacgcccttgtcaccccagtcc
tccttcaagaagttccgtttcttgagagaccccccagttctgtccccatcttgctctgca
tccctggtcatcaagaggccccgtacattctctgacagcccccatactcaggcctccgct
ctccagtccccaagaaaacctggggaacaagagcaggaaagtactctgcaggggtccaag
ctttcttctggacaggcagcatcacagatgcctgcaagaaaggggttccttgtttctgga
ccaactgcagcagacacgtcagacacgacagggccagagaccccagtgattggcacacta
ggcaagagtcctgaagaagaaaaggccaaggagcatgtcttagcagataaggagacaaac
aaacaggaagtgggagagagagccagaggtgttaaacgggtggatgcaggaaacgtcccc
ttgagtccagcagaatctgtggtacctccctcacccccaccggaagagggcaatgtagac
cggggaagggagagaagtcaaaagaaacaagagaagcgtggaagacgagcttcctcatct
agtgactcctcagattctgactctgggtcatcctcctcacgctcgtctggttcatcttcg
tcctcccagggcaaaactctcaccactcccagtggtagaaagcctgagaaacctcagaca
aaaaccatatcccaggataaggagacagttagtcaacttgaggagtccccaaaagcaccc
cagcgcaaaaatcgagtacctggggagaaggacatgaccatcgatggagccagacacggc
aagaaatcgtttgttggaatacctgctggacaagacaatgagcagaaggacagcgaggga
gaggaggaaatgacagacactacaagcgaggtgaaggaggctgccatggctgagcctgag
cgggctcctgagtgcagtgaggagagtctgacgccaaaggcattcacagcccgtaggatc
tccctgagcagcagcaaggcctctccaggtgtcgtcagtgcagagggcgaggcagagtct
ggggctggccccgggaggaagaggaggtggggttccagcactgcggtcacagccaagaaa
ccatccatcagcatcaccacagactctctgaagtctctgatcccagacatcaggctgagt
ccaggacaggaggcggtggtggatctacacccagaggaagttcacctctctgggggagag
gaggacagggagcagggcgagcaagacttcaagatcagacgcacggtcacacaggtggtc
ctgtccgagacccaggagaatggaccgaaggagtccaagaggagtgagaacatggagaac
agagaggatggagtggaggttaaaagcgacagagaggagaagatggacgactcattccag
agagactccatggagacacaatccccctctccccccatccatgacatggagatgaacaca
gtgaccccaagtgacaccctgatccgtcgctccatcagccagcagaagtctggcgtgtcc
atcaccatagacgaccctgtccgcacggccaagcagccctctcctccacgaggcaaagtg
tccaacattgtccacctgtccaacctggttcggccgttcaccctgggtcagctgaaggag
ctgctcagcaggactggcaccgtactggaggacggcttctggatcgacaagatcaaatct
cactgctacgtcacctactccagtgcagaggaggcagtggccactcgtgcagcactacat
ggggtgaaatggcctcagagcaaccccaagttcctctgtgtggacttcagtcagcaagag
gagcttgacttccacagaggcttgccaccccctgggggggctggagaggaggagcggggg
gcttcatcggtgcctggccgaggtcggggggcggccctgccccctcttctgcccgagcgt
ggccagtgggcagagcgagagcgtgagatggagcgcagggagaggacccgggcggagagg
gagtgggacagggacaaggtccgggactttggtcccggaaaacctggagaggatgcgggc
cccagacgatcgcgctccagagagaggaagcgcaaggagaggaagatggacaagaaagag
aaagctgcagaagaagcccctgccaaactgctggatgacctgttcaataaaaccaaagca
gccccttgtatatactggctccccctcacagaagagcagtttacacagagggaagtagct
cgacaagagaggaggaaggagcgagagaagaggaggaaggagcagcaagaggaggaggag
aagaaaagggaggaagagcgcaaagaaaggataaaagcatctggcgaaagaggcgagggg
gacagggacagagagcgagacagggaaaggggcaaagacagggaccgagacagagagggt
gacaaacacagagaaagcagccaccgcagaccagggggcaacagtgcaggggtgggcaga
cgctctcgcagccgcagtgatcctccacctcgtgacagacgacgctag
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integrated database retrieval system
