Oncorhynchus masou masou (cherry salmon): 135559010
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Entry
135559010 CDS
T10723
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135559010 (ncstn)
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Gene cluster
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
135559010
NCBI-ProteinID:
XP_064849382
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Position
17:38507177..38525541
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AA seq
697 aa
AA seq
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MGLESSKWAIIFLVCWLYKNVSCNSVEQKIYVELNNTVPCVRLLNATHQIGCQSSISGDT
GVIHVLDSEADLEWPLSKGPNPPYMVLLESSLFTRSIMMKMKNESNRVAGVAVVVPNTSP
PEFSPHTTCPNENTGVYSDNYGPNLAHCNTTVWNPRGNGLSYEEFDFPVFSLKEDNETEF
IKQCYLDHNRAVNGSAPQYPLCAMQLFSHMHAVTNTPTCMRRNDINFSINPEMVCDPLGD
YNVWGSIRPYNDTVFGHKENESVVIAAARLDSRAFFWEVSTGAEGSISGFVTLLAAAQAL
RKVTQEAPPTRNILFAFFQGETFDYIGSSRMVYDMENGKFVIDLDNIHSVLEIGQVAVHS
GANLFLHSDPVSRRNNTVNDEVKNLVNNLQSSTAGLSFVLVEPNVSQPLPPSSLQRFLRA
QPIPGIVLANHESAFNNRYYESFYDNAANLNLTYPSDLSPEEQLEFVTDTAKSLTDVATV
VARALYKQAGGDESLVSTINADPRTVTQMLYGFLVSSNNSWFQAVMAPELKNILKPSPPE
YYVGVALSSTPTRLVQYLLANLTGAATNLTQSQCQKPDELPNESRQMYSYLWVQGIVPPN
STERDSFCVRASVRLTKAVSPAFELGEYASKDYSTWTESRWKFIKARIFLVASRDLEMLT
LGVGVAVLFTSLLVTYFISTKADVLFSSTREPASAAY
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggaatcgtcgaaatgggctataatattcttagtttgttggctttacaaaaat
gtgagctgtaactctgttgagcagaagatttatgtggagctgaataacactgtaccatgc
gttcgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgataca
ggtgtgatccatgtcttggattctgaggcagatctggaatggcctttgagcaaaggaccc
aatcctccttatatggttctgttggaatcatccctcttcaccaggtccatcatgatgaag
atgaagaatgaatccaacagggtagctggggttgcagtggtggtcccaaatactagccca
ccagagttctcaccacacacgacatgtcccaatgaaaacacaggtgtatactccgacaac
tatggtcctaatttggcacactgtaacactactgtatggaaccctcgggggaacggtcta
tcctatgaggaatttgacttccctgtcttctccttgaaagaagacaacgaaacagagttc
atcaaacagtgctacttggaccataatcgtgcagtgaacggcagtgccccgcagtaccct
ctgtgtgccatgcagctcttctcccacatgcacgcggtcaccaatactccaacctgcatg
agacgcaacgacatcaactttagcatcaacccagagatggtgtgtgaccctctgggtgat
tataatgtttggggttccatccggccctataacgacaccgtcttcggccacaaggagaac
gagagcgttgttatagcagcagccaggctggacagcagggcatttttctgggaggtttca
actggagcagagggaagtatctcagggtttgtcactctgcttgctgctgcccaggcactg
cgtaaagtcactcaagaggcccctcccacacggaatatcctctttgccttcttccaaggg
gaaacctttgactacattggcagctctcggatggtttacgacatggagaacggcaagttt
gtgatagacttggacaatattcactcagtactagagattggtcaggtggccgtgcatagt
ggcgccaacctctttctccactcagaccctgtgtccaggaggaacaacactgtcaatgac
gaggttaagaatcttgtgaacaatttacagtcctccacagctgggctcagcttcgtattg
gttgagcctaatgtctctcagccactcccgccctcctccctccagcgtttcctgcgagct
cagccaatcccagggattgtgcttgcaaaccacgaatccgctttcaacaacaggtactac
gagagtttttacgacaacgctgctaacctgaacctgacttatccatctgacttgagtcca
gaggaacagctggagtttgtgactgatactgcaaagtcccttactgatgtggccacagtg
gttgcacgtgctctctacaagcaggccgggggagacgagtcccttgtcagcaccatcaac
gcagaccccagaacagttacacagatgctgtatgggtttctggttagttccaacaacagt
tggtttcaggcagtgatggccccagaactaaagaacattctcaagcccagcccaccagag
tactatgttggtgttgcattgtcttccactccaactcgtctggtccagtacctcctggcc
aatttaactggagcagccaccaacctcacccagagtcagtgccagaagccagatgagctg
ccgaacgagagcagacagatgtactcctatctctgggttcagggcattgtcccacccaac
agcaccgagagggattctttctgcgtacgtgcatcggtacgcctgaccaaagcagtgtcc
cctgccttcgagctcggagagtatgcttccaaagactattccacgtggacagaatcacgg
tggaagttcatcaaagctcgaattttcctagtagcgagccgggacttggagatgctgacc
ttaggcgtgggagtggcagtgttgttcacatccctactggtgacatacttcatcagcacc
aaggcagacgtcctcttcagctccacgagggaacccgctagcgccgcctattga
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