Oncorhynchus masou masou (cherry salmon): 135559027
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Entry
135559027 CDS
T10723
Name
(RefSeq) cell adhesion molecule 3-like isoform X1
KO
K06780
cell adhesion molecule 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135559027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135559027
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Nectin family
135559027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C1-set
C2-set_3
Syndecan
Ig_C17orf99
Lep_receptor_Ig
He_PIG
Motif
Other DBs
NCBI-GeneID:
135559027
NCBI-ProteinID:
XP_064849409
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Position
17:complement(39367178..39449729)
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AA seq
411 aa
AA seq
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MAFPSYPVPGLWTLSLLTLLAASVQSNSIVFDDDPMQPVTQDETVSVGGTVTLTCRVTES
DNSSLQWSNTAQQTLYFGEKRALRDNRIQLHQSTGTELSITIGDIQLSDEGEYTCSIFTM
PVRTARATVTVLGVPGKPQISGYEDAVQEGGKVTLTCTSSGSKPPAKLHWYRDQKELTGR
PDVVESNPGEPTYTVISELTLTVGRSDDNALIACAVDHPSLAHGDKGSEQRIRVLFTPDV
TIQPESDLPREGGKFHLQCIANGNPEPISYVWQKKDGELPPLAKVDGSVLRFEMLNKSDN
GMYLCQADNGIGKVQGQYTLLVQDGPDNIADPTAMSTSSGVDHAVIGGVVAVIVFILLCL
LIVLGRYLIRHKGTYLTHEAKGSDDAPDADTAIINAEGGHSGAEDKKEYFI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcattcccttcttacccggtccctggtctatggactctgagcttattgacactactg
gcagcctctgttcaaagcaactccatcgtttttgacgatgaccccatgcagccggtgacc
caggacgagacggtgtcggtgggcggcacggtgaccctgacctgccgggtgacagagagc
gacaactcctccctgcagtggtccaacacggcccagcagactctgtactttggagagaag
agagctctgagagataaccgtatccagctccaccagtcaacaggcacagagctgtccatc
accattggagacatccagctgtcagacgagggggagtacacctgctccatcttcaccatg
cccgtccgcactgcccgtgccaccgtcactgtgctaggtgtccctggtaagcctcagatc
tctggctatgaggacgctgtacaggaagggggcaaagtcaccctcacctgcaccagctcc
gggagcaagcctcccgccaaactacactggtacagggaccagaaggaactcacaggtcgc
cctgatgtggtggagtctaaccctggtgagccgacctacacagtgatcagtgagctgact
ctgactgtgggccgaagcgatgataatgctctgattgcctgtgctgtagaccacccttct
ctggcccatggggacaaagggagcgagcaacgcattagagtcctgttcaccccagatgta
actatccagcctgagagtgatctgcccagagagggaggaaagttccacctgcagtgcatt
gccaacggaaaccccgagcctatctcgtacgtgtggcagaagaaggatggagagctcccc
ccgctggccaaggtggatggtagtgtcctgcgctttgagatgctcaacaaatcagacaac
ggcatgtacctttgtcaggccgacaatgggatcgggaaggtgcagggacagtacacactg
ttggtgcaagatggtccagacaacattgcagaccccactgccatgtcgacctcttcagga
gtggaccatgctgtgattggaggagtggtggcggtcatagtctttatcctgctctgtctg
ctcatcgtcttgggcagatacctcatcagacacaaagggacatatcttacccatgaggcc
aagggctccgatgacgctcccgacgccgacacggctatcatcaacgccgagggcggccat
tccggagcagaggacaagaaagagtacttcatctag
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