Oncorhynchus masou masou (cherry salmon): 135559062
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Entry
135559062 CDS
T10723
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135559062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135559062
Spliceosome [BR:
omm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135559062
Complex C
U4/U6.U5 tri-SnRNP related factors
135559062
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
135559062
NCBI-ProteinID:
XP_064849485
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All DBs
Position
17:complement(41926556..41941091)
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AA seq
454 aa
AA seq
DB search
MANNTVAANQQQPQAVSRIGPNAGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFS
IKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKLIDTQMKARPRKVPEKVEEPEEPPAEGRRR
SRSPRPTPSPRRTPQRSRSRGPSFDRELERERDRQRKERDSGDGKGEERERRRSRSADRT
QERRERRRSREQKDGQGGVEKDRRKDREYHKDGGSERERSKDKRSKGEAEDRRQKEERDE
RRGHREERKARRSSRSASRERRHKKSIKRQVHEESRGGAEEKEKSRKKQCSREGEQRAHK
HSRSKERSHRPREPSNGKDQGKHRECKMSQSTER
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtcgccgcgaaccaacagcaaccacaggccgtgagcaggattggc
cctaacgctggaaaacatggcaacaacttgcctctctggggcaacgaaaagactatgaac
ctgaaccctatggtcctcaccaacgttctctcatctccatatttcaaagtgcagctgtat
gaattgaaaacctaccatgaggtggtggatgagatctatttcaaggttactcatgttgag
ccctgggagaaaggcagtaggaagactgccggacagactggaatgtgcggaggggtgcgg
ggagtcgggaccggcggcattgtgtccacagccttctgcctgctgtataaactgttctcc
atcaagatgacccgtaaacaggtgatgggactgatcactcacaacgactcaccctacatc
agagcacttggctttatgtacataagatacacccagccccctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggcggctgcgtt
atgacaatcggagagatggtccggtcgttcctcaccaagctggagtggttctccactctc
tttccacgcatcccggtgcccgtgcagaagctgatcgacacgcagatgaaggcaaggccc
cggaaggttcctgagaaggtagaggagccagaggaaccaccagcggagggccgtagacgg
tccaggagccccagacctacccccagccccaggaggactccccaacggtccaggagccgc
ggccccagcttcgaccgcgagctggagagggaacgcgaccgccagaggaaagagcgggac
tctggggacgggaaaggagaagagagggagaggcgtcggtcccgcagcgcagaccgtacc
caggagcgccgggaacgtcgcaggagccgggagcagaaagatggacaggggggcgtggag
aaggacaggaggaaggacagggagtaccataaagatgggggtagcgagagggagaggtcc
aaggacaagaggagcaagggagaagcggaggacaggagacaaaaagaagagagagatgag
aggaggggtcacagggaggagaggaaggccaggcgctccagtcggagtgcaagcagggaa
aggagacacaagaagtccataaagcgacaagtccatgaagagagcagaggcggggctgag
gagaaggagaagagtaggaagaagcagtgcagccgggagggggagcagcgcgctcacaaa
cacagccgcagtaaagagcggagccatcggccacgtgagcccagcaatgggaaagaccag
gggaaacacagggagtgtaaaatgagccagagcacagagcgatga
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