Oncorhynchus masou masou (cherry salmon): 135559290
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Entry
135559290 CDS
T10723
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecule (CAM) interaction
omm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135559290
04517 IgSF CAM signaling
135559290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135559290
04090 CD molecules [BR:
omm04090
]
135559290
04091 Lectins [BR:
omm04091
]
135559290
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
L1 family
135559290
CD molecules [BR:
omm04090
]
Proteins
135559290
Lectins [BR:
omm04091
]
I-type lectins (Siglecs)
135559290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Bravo_FIGEY
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_VEGFR-1-like_5th
Tissue_fac
VEGFR1-3_N_Ig-like
C2-set_3
V-set_CD47
CRLF2-like_D2
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
135559290
NCBI-ProteinID:
XP_064849554
LinkDB
All DBs
Position
18:13461706..13494198
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AA seq
1154 aa
AA seq
DB search
MSTYHAAFWSSEPSNYSSSDEEGDDRDRHTPALQKEQKVKKKVEEGESVVLKCNPPFSTV
PPVIHWMDERMHHIELNDRVTQGRDGNLYFSHVTVDDTRIDYTCNAQYLSARTILSKEPI
TLTVTTSNSVVRSRRPQMMRPSGTHSTYHALRGQSLELECIVQGLPTPTVQWVRKDGQLS
ESRTSRHLFDRLLRISNISDSDGGEYQCSVNNSQGKVTHTYTVSVEAAPYWTKEPVSQLY
APGETVKLDCQADGIPSPAVAWSINGKPITGIDPTPRRTVRDRTLILRDVVFTDTAVYQC
QAHNKHGTILVNTYIFVIELPPQILNADGQKYNFTEGQMAVLQCQTFGSPRPKVTWERNS
SASLLAEPRVNLLTNGNLQITNVSHGDEGLYTCSVSNTNLSINADLDVMNRTVILSPPGS
LLVQPGKTAIFTCLAQVDPKLTPPHIQWKRSGQELFQSYAEDKYTFEGPDLIVANVQTED
EGVYTCEVITNLDRVEASGSIIIVDRPDPPTQLQVSDPKDRSVTLSWTAGDDHNSPVIVF
VVEFEDGDSKERGWEELKRVSGTHESVTISLQPYMSYRFRVISINNIGKSDPSMPSDLHS
TPPQAPDNNPENVRSESTDPDTLVITWEEMDRRVFNGPEFHYKVFWKRVVGDTTWYSDVS
TEPPYIVTEVGNFSAFQIKVQAANQKGDGPELDPVTGYSGEDIPLKAPQNVTMELLNSSA
IRVTWEPGNEKTVRGHLLGYKIHLLRFGSRGHHQGRRAREPDTSVEVETGPKEEKRVLGG
LRPYSHYTLTVTVFNSKGEGPPSKTLSFETDEGAPGPPMSLRLDSHAGTEMTLHWTPPAQ
PNGVLKGYLLQYQSVVKSDSPMQVETIDDHKVTHLTLKQLDPHSRYRFYLRGRTSAGDGE
PITREGATTLDGAPPSNISLYVGEQSVNLSWVPGQRQRSVSFQVQYLNKQDGGKWKQSEK
LNSSASFYQLKGLTPGSQYRLRFTFSNNTFWETEITTKGAGVMDVQTGFATQGWFIGLVS
AIVLLLLVLLILCFIKRGKGGKYSVKDKEEGQVDSEARPMKDETFGEYSDNEEKRTASQP
SLCDESKLCISDDNLDGYNNGSIAVTEVTMEDSLVSQYSRPSEATPDPGTLQDSSPLNPN
TTTNGLPNSAAILD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagcacataccacgctgcattttggtcctccgaaccttccaactactcctcctcagac
gaggagggcgacgatcgtgacagacacaccccggccctgcagaaagagcagaaggtgaag
aagaaggtggaggaaggagagagtgtggtactgaaatgtaaccctcccttcagcactgtt
cctcctgtcatccactggatggatgagcgaatgcatcacattgagctaaatgatcgtgta
acccagggccgggacgggaacctatacttctctcacgtcaccgtcgatgacacccgtatt
gactacacctgtaacgcccagtacctcagcgctcgcaccatcctctccaaggaacccatc
accctgactgttacaacctctaactcagtggttcggagccgaaggccccagatgatgagg
ccctcggggacccacagcacttaccacgccctccgaggccagagcctggagctagagtgc
atcgtccagggcctccctacccctacagtccagtgggtgaggaaggacggtcagctgtcc
gagtcccgtacgtccagacatctgtttgaccgtctgctgcgcatcagtaacatctcagat
agcgacgggggagagtaccagtgttcagtcaacaactcacagggcaaggtcacacacacc
tacaccgttagcgtcgaagcggctccatactggaccaaggagccagtcagccagctctat
gccccaggagagacggtgaaactggactgtcaggctgatggcatcccgtctcctgctgtc
gcctggagcatcaacggaaaacccatcacaggcatagacccaacccctaggcgtactgtg
agagatagaactctgattctgagagatgtggtcttcactgatacagcagtctaccagtgt
caggcccacaacaaacacggaaccatcctagtcaatacctacatcttcgtcattgaactg
cctcctcagatcctgaatgctgacggacagaagtacaacttcacagagggacagatggct
gtactgcagtgtcagaccttcggctctcccagacctaaagtaacatgggagaggaacagc
agcgcttctctactggctgagcccagggttaacctgctgaccaatggaaacctccagatc
accaacgtctcccacggcgacgagggcctgtacacctgctccgttagcaataccaaccta
tcaatcaacgctgacctggatgtcatgaacaggacagtgatcctgtctcctcctgggtct
ctgcttgttcagcctggtaagacggccatctttacctgcctggcacaggtggaccccaaa
ctgacccctccacacattcagtggaagaggagcggacaggaactctttcagtcatacgca
gaggacaagtacacatttgagggcccagacctgattgtggccaatgtgcagacagaagac
gagggtgtttacacctgtgaggtcatcaccaacctggacagggttgaggccagcgggtcc
atcattatagtcgaccgtccagaccccccgacccagctccaggtctctgaccctaaggac
cgcagtgtcaccctgagttggaccgcaggagatgaccacaacagccctgtcatagtgttt
gtggtggagtttgaagatggtgactctaaggagcggggttgggaggagctgaagagagtc
agtggaactcatgagagcgttaccatttctctgcaaccatacatgtcctaccgcttccgg
gtcatctccatcaacaacatcgggaagagtgaccccagcatgccctctgaccttcacagc
accccacctcaagctccagacaataacccagagaatgtgaggagtgagtctacagaccca
gacacactggtcatcacatgggaggagatggacaggcgtgtgtttaacggcccagagttc
cactacaaggtgttctggaaaagggtggtaggtgacacaacctggtactctgatgtctcc
actgagccaccgtacatcgtcactgaagtgggcaacttctccgcctttcaaatcaaagtt
caggctgccaatcagaaaggagatggacctgagctagaccctgtgactggttactctgga
gaggacatccccctgaaggctcctcagaatgtgactatggagctgctcaacagttcagcc
atcagggtgacatgggaaccagggaacgaaaagactgtcagaggacacctgctgggatat
aagatccacctgctgaggtttggctccaggggccaccaccaaggccgcagggctagagag
ccagacaccagtgttgaggtggagacagggcccaaagaggagaagagggtcctgggggga
ctcagaccctactctcactacaccctcactgtcactgtgttcaacagcaagggagagggc
cccccctccaagaccctgtcctttgaaactgacgagggagctcctggccccccgatgtcc
ttacgcctggacagccatgcaggcacagagatgaccctacactggacacctcctgcccaa
cccaacggggttctcaaaggatacctgctgcagtaccagagtgtcgtaaagagtgacagc
ccgatgcaggtggagacgatagacgatcacaaggtcactcacctgaccctgaagcagttg
gaccctcacagccgctaccgcttctacctgagggggcgcacctcggccggggacggagag
cctatcaccagggagggagctaccacactggacggagctcctccgtccaacatcagcttg
tatgtaggagagcagtctgttaacctgagctgggtgccaggacagagacagaggagtgtg
agcttccaggtccagtacctcaacaagcaagacggtgggaagtggaagcagtctgagaag
ctgaactcgtctgcatcattctaccagctgaaaggcctgaccccggggtcacagtaccgc
ctcagattcaccttcagcaacaacaccttctgggagactgagatcaccacaaagggagca
ggggtgatggatgtgcagacaggctttgctactcagggctggtttattgggctcgtgagc
gccatcgtgctgttgctgctggtgctgctcatcctctgctttatcaagagaggcaaaggg
ggaaagtattcagtcaaagataaggaggagggtcaggtagactctgaggcgcgccctatg
aaggatgaaacattcggagagtacagtgacaacgaggagaagcggacagccagccaacca
tctctgtgtgatgagagcaaactgtgtatcagtgacgacaacctggatggctataacaat
ggtagcattgctgtcaccgaggtgaccatggaagactccctggtcagccagtacagccga
cccagcgaagccaccccggacccgggcacactgcaggacagctcccccctcaatcccaac
accaccaccaatggcctgcccaactcggccgccattttagattag
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