Orbus mooreae: RHO11_00415
Help
Entry
RHO11_00415 CDS
T10515
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
omo Orbus mooreae
Pathway
omo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO11_00415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omo03019
]
RHO11_00415
Enzymes [BR:
omo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHO11_00415
Messenger RNA biogenesis [BR:
omo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHO11_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
HI1480
UTP25_NTPase-like
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
WVD61625
LinkDB
All DBs
Position
complement(97600..98823)
Genome browser
AA seq
407 aa
AA seq
DB search
MSFDSLGLNTEILRAVQEQNYTTPTPIQQQAIPIILSGKDLIASAQTGTGKTAGFVLPIL
QKLAESQSKVTNPTAKGKRPIYALILAPTRELAAQIGDNIRDYSRYLAIRSLVVFGGVSI
NPQMMKLRGGVDILVATPGRLLDLLQKNTVELSTVKVLVLDEADRMLDMGFIHDIKRVIN
KLPKKRQNLLFSATFSDEIKQLSQSILQSPESVSVAKENSSSEQITQYIHRVDKSRKREL
ISYLIGKNQWQQVLIFTRTKYGANHLAEQLTKDGIKASAIHGNKSQGARTKALADFKNGQ
IRVLVATDIAARGLDIELLPYVVNYDLPHVAEDYVHRIGRTGRAQNKGQAVSLVCIDDLP
QLKAIEKLLGMSIPEIKTDGFAVNPNIKASPPPAKKISQRSGKKVVK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctcttggcctcaacaccgagatattacgcgcagttcaagaacaaaac
tacaccacaccgacacccattcaacagcaagccattccgattattttatctggaaaagat
ctaattgctagcgcccaaacaggtactggaaaaacagccggatttgtactccctatttta
caaaaactggcggaatcacaaagtaaagtgaccaaccctaccgctaaagggaaaagacca
atttatgcattaattttagcaccgacacgcgagttagcagcacaaattggtgataatatt
cgtgattatagccgttatctagctattcgctcattagtggtctttggtggtgtaagtatt
aatccacaaatgatgaaattaagaggcggtgtcgacattttagtcgcaacgcctggacga
ttattagatttattacaaaaaaataccgtagagttatctaccgtcaaagtattggtactt
gatgaagctgatcgtatgttagatatgggatttattcatgatataaaacgagttattaat
aaattacccaaaaaacgccaaaatttactattctcagcaacgttttctgatgaaataaaa
caactatcacagtcgattttacaatcaccagaatctgtttcagtagcaaaagaaaatagt
tcgtcggaacaaatcactcaatatattcatcgtgttgataaaagtcgtaaacgtgaactc
atttcttatttaattggtaaaaatcaatggcaacaggtattaatttttacgagaactaaa
tatggtgctaatcatctcgctgaacagctaactaaagatggtattaaagcctcagctatt
catggtaataaaagtcaaggagccagaacaaaagcgctcgctgactttaaaaatggtcaa
attcgagtactagttgcaaccgatattgccgccagagggttagatattgagttgttacct
tatgtcgttaattacgacttacctcatgtagcagaagactatgttcatcgaattggccga
actgggcgagctcaaaataagggacaagccgtttcattagtatgtatcgatgatttgcca
caactgaaggcaattgaaaaactattaggaatgagtattcctgaaataaaaacagatgga
tttgccgttaatccgaatattaaagcatcaccacctccagctaaaaaaatatcccaacga
tcgggtaaaaaagtggtaaaataa
DBGET
integrated database retrieval system
