Orbus mooreae: RHO11_00575
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Entry
RHO11_00575 CDS
T10515
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
omo Orbus mooreae
Pathway
omo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO11_00575 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omo03019
]
RHO11_00575 (pnp)
03016 Transfer RNA biogenesis [BR:
omo03016
]
RHO11_00575 (pnp)
Enzymes [BR:
omo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RHO11_00575 (pnp)
Messenger RNA biogenesis [BR:
omo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHO11_00575 (pnp)
Transfer RNA biogenesis [BR:
omo03016
]
Prokaryotic type
tRNA degradation factors
RHO11_00575 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
KH_2
S1_RRP5
S1_2
Flagellin_IN
Spt6_S1
DUF5813
Motif
Other DBs
NCBI-ProteinID:
WVD62914
LinkDB
All DBs
Position
134282..136414
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AA seq
710 aa
AA seq
DB search
MTLFNPITQKFQYGRHTVTLETGIMARQATAAVMVNIDDTAVFVTVVANQKVKEGQDFFP
LTVNYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPLRPLFPEGFVNEIQIIATVV
SINPQVSPDLVAMIGASAALSLSGVPFHGPIGAARVGFIDGEFVLNPLVTELPSSRLDLV
VAGTNSAVLMVESEADLLTEEQMLAAVVFGHDAQQVVINNINEFVAKAGRAKWDWVAPAK
NEVLHDAVSALVKDRIGEAYRITEKQARYAQINAIKEEALAQLKAQNEEIDDNEVLNIIT
EIESQTVRKRVISGEPRIDGREKDMIRALDIRTNVLPRTHGSALFTRGETQALVTATLGT
ERDAQIIDELTGEKTDKFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVAAVMPKG
NEFPYTVRIVSEITESNGSSSMASVCGASLALMDAGVPIKSSVAGIAMGLVKEGDDFVVL
SDILGDEDHLGDMDFKVAGTREGVSALQMDIKIEGITKEIMQVALNQAKGARLHILGVME
QAINCPRNEISEYAPRIYTMKINPEKIRDIIGKGGATIRALTEETGTTIEIEDDGTVKIA
ASDGDKAQAAIKRINDLTAEVEVGQIYTGKVVRIVDFGAFVSIIGGKEGLVHVSQIADHR
VEKVTDVLTMGQEVQVKVLEIDRQGRIRLSMKDAVNTSAPAAEAATTTEE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atcacattgtttaatcctatcactcaaaaatttcaatatggtcgtcataccgttacttta
gaaaccggtattatggctcgtcaagcaacagctgctgtaatggttaatattgatgatact
gccgtatttgttactgttgttgctaatcaaaaagttaaagaaggtcaggactttttccca
ttaacggttaattaccaagagcgtacttatgctgctggtcgaatccctggtggtttcttt
aaacgagaagggcgtcctagtgaaggcgaaactttaattgctcgtttaattgaccgtcca
ttacgaccgttatttcctgaaggttttgttaatgaaattcaaatcattgcaactgtggtt
tctatcaacccacaagttagtcctgatttagttgcaatgattggtgcatctgctgcttta
tctttatctggtgtaccgttccatggcccaatcggtgctgctcgtgttggtttcattgat
ggtgagtttgtgttaaatccactagttactgaactaccaagtagccgtttagatttagtc
gttgcaggtacaaatagtgcagtattaatggttgaatctgaagctgatcttttaactgaa
gaacaaatgcttgctgctgttgtatttggtcatgatgcacaacaagttgttattaataat
atcaatgagtttgttgcaaaggctggtcgagctaaatgggattgggttgctccagctaaa
aatgaagtactacatgatgcggtttcagcgttagttaaagatcgtattggtgaagcgtat
cgcattactgaaaaacaagctcgttatgctcaaattaatgctattaaagaagaggcatta
gctcaattaaaagctcaaaatgaagaaattgatgataatgaagtgttaaatattattact
gaaattgagagccaaactgttcgtaaacgtgttatttctggcgaaccacgtattgatggt
cgtgaaaaagatatgatcagagcattagatattcgaactaatgttcttcctagaacacat
ggtagtgctctatttactcgtggtgaaacgcaagctttagttactgcaacattaggaaca
gaacgcgatgcgcaaatcattgatgagttaactggtgaaaaaactgataagtttttattc
cattataatttccctccatactctgttggtgaaacaggaatggttggttcaccaaaacgt
cgtgaaattggtcatggtcgcttggctaaacgtggtgttgcggctgttatgcctaaaggt
aatgaattcccatataccgtccgtattgtatctgaaataacagaatctaatggttcatca
tcaatggcttctgtatgtggtgcctctttagctctaatggatgcgggtgtaccaattaaa
tcatctgttgctggtatcgctatgggactggtcaaagaaggtgatgattttgtcgtttta
tctgatattttaggtgatgaagatcatcttggtgatatggactttaaagttgctggaact
cgtgaaggtgtaagtgcattacagatggatatcaagatcgaaggtatcactaaagagatt
atgcaagttgctttaaatcaagcaaaaggtgctcgtttacatattcttggtgtaatggaa
caagcaattaattgcccacgtaatgagatttctgaatatgctcctcgtatctatacgatg
aaaattaatccagaaaaaattcgtgatatcatcggtaagggcggtgcgactattcgagca
ttaacagaagagactggaacaaccattgagattgaagatgatggtactgttaaaattgct
gcatctgatggtgataaagcacaagctgctattaaacgtattaatgatttaactgctgaa
gttgaagtgggtcaaatctataccggtaaagtggttcgaattgtagattttggtgcattc
gtatcaattattggtggtaaagaaggcttagtgcatgtttcacaaatcgcagatcaccga
gttgagaaagtgactgacgtattgactatgggacaagaagttcaggttaaagtacttgaa
attgatcgtcaaggacgcattcgtttaagtatgaaagatgcagtcaatacttcagcacca
gcagctgaagcagcaacaacgactgaagagtag
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