Orbus mooreae: RHO11_00585
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Entry
RHO11_00585 CDS
T10515
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
omo Orbus mooreae
Pathway
omo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO11_00585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omo03019
]
RHO11_00585
03009 Ribosome biogenesis [BR:
omo03009
]
RHO11_00585
Enzymes [BR:
omo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHO11_00585
Messenger RNA biogenesis [BR:
omo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHO11_00585
Ribosome biogenesis [BR:
omo03009
]
Prokaryotic type
rRNA helicases
RHO11_00585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DUF5063
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
WVD61656
LinkDB
All DBs
Position
137564..139381
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AA seq
605 aa
AA seq
DB search
MTKEISFIDLGLSEEILNALNDLGFAKPSPIQSECIPLLLEGNDVLGMAQTGSGKTAAFS
IPFLMKLDANLKAPQVLVLAPTRELAIQVAEACSEYAKYMKGVKVLALYGGQRYDVQLRA
LKQGPQIVVGTPGRLLDHLNRKTLDLSNLKGLVLDEADEMLRMGFIDDVESIMAAIPEEH
QTALFSATMPAPIRRITKRFMHNPQEIQIKSTNQTAPDIDQSYWLVRGLRKNEALVRFLE
AEDFDAAIIFVRTKTATLEVADVLEQHGYNSAALNGDMTQQLREQTLDRLRNGRLDILIA
TDVAARGLDVERISLVVNYDITMDSESYVHRIGRTGRAGRAGRAILFVDSRERRLLKNIE
QTIKKAIPEVQLPSKDLLETRRLSKFSDKVAKEIESNDLDTYRSLLPQLLKTDDTDMETL
AAALLKLAQGERPLVLPPDPVFKPAREDRERAERGDRRLKGDNRESPKRRERRDVGDMDL
YRIEVGKENGIDVRNIVGAIANEGDISSRYIGNIKLYEKYSTVELPKDMPKDLLKHFEKV
RVMNVPMNMRLVVDGEKTSSSPRRSSRKREDSFGEQPPKRRSRAPSKDGDKDAAPKRRSR
KPASF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaatctcttttattgaccttggtttatctgaggaaatccttaacgcatta
aatgatcttggttttgcaaaaccatctccaattcaaagtgaatgtattcctttattatta
gaaggtaatgatgtgcttggtatggcacaaactggtagtggtaaaactgctgcattttca
attccttttctaatgaaattggatgctaatttaaaagcaccacaagtattagtattagca
ccaacacgagaattagcaattcaagttgctgaagcatgtagtgaatatgcgaaatatatg
aaaggtgttaaagttttagctctttatggtggtcaacgttatgatgtgcaattacgtgca
ttaaaacaagggccacaaattgtagtgggtacgccgggtcgtctactcgatcatttaaat
cgtaaaactcttgatctatctaatcttaaaggtttagttcttgatgaagctgacgaaatg
cttcgcatgggctttattgatgatgttgaaagtattatggctgcgattccagaagaacat
cagaccgcgttattctcagcaacgatgcctgctccgattcgtcgcattactaaacgattt
atgcataatccacaagagattcaaatcaaatcgactaatcaaacagcaccagatattgac
caaagctattggttagtacgaggattacgtaagaatgaagcattagtccgctttttagaa
gcagaagattttgatgctgcaattatctttgttagaaccaaaacggcaacattagaagtg
gctgatgtactagaacaacacggctataatagtgcggcattaaatggtgatatgactcaa
caattacgtgagcaaacattagatcgtttacgtaatggtcgtttagatattttaattgca
actgatgttgctgcacgtggattagacgttgaacgtattagtttagttgtcaattacgac
attactatggattcagagtcttatgtacaccgtattggccgtacaggtcgagcaggtcgt
gctggtcgtgcaattttatttgtagatagccgtgagcgccgtttattaaaaaatattgaa
cagacaattaaaaaagcaattcctgaagtacaattaccaagtaaagatttacttgaaacg
cgtcgtttatctaaattctctgataaagttgctaaagagatcgaatcaaatgatttagat
acttaccgaagtcttttacctcagttattgaaaactgatgatactgatatggaaacctta
gctgctgcattattaaaacttgcacaaggtgaacgtcctttagttttaccaccggatcca
gtatttaaacctgcgcgtgaagatcgtgaaagagcagaacgtggtgatcgtcgtctaaaa
ggtgataatcgtgaatcaccaaaacgtagagaacgtcgtgatgttggtgatatggatctt
tatcgtattgaagtaggtaaagagaatggtatcgatgttcgtaatattgttggtgcaatt
gctaatgaaggtgatattagtagccgatatattggtaatatcaaactttacgaaaaatat
tcaacagttgagttaccaaaagatatgccaaaagatttattgaaacattttgaaaaagtt
cgtgtcatgaatgtgccaatgaatatgcgtttagttgttgatggtgagaaaacaagttct
agcccaagacgttcttcacgtaaaagagaagactcttttggtgaacaaccaccaaaacgt
cgtagccgtgctccatctaaagatggtgataaagatgcagcaccaaaacgtagatcaaga
aaaccagcatctttttaa
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