Orbus mooreae: RHO11_08505
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Entry
RHO11_08505 CDS
T10515
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
omo Orbus mooreae
Brite
KEGG Orthology (KO) [BR:
omo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omo03009
]
RHO11_08505 (rlmD)
Enzymes [BR:
omo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RHO11_08505 (rlmD)
Ribosome biogenesis [BR:
omo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RHO11_08505 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
RrnaAD
MTS
PCMT
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Methyltransf_11
NodS
PH_EXO84
Motif
Other DBs
NCBI-ProteinID:
WVD60536
LinkDB
All DBs
Position
complement(1813486..1814835)
Genome browser
AA seq
449 aa
AA seq
DB search
MVVFYSAPKKTVSKPTKMTLHIDSIDAFGQGVARHHGKTIFVKNALPTEDVDVKVTEDKK
QYAKATVLKYLRKSDQRIIPACMHYSVCGGCEMQHIPSKMQHHIKAQAFSDLFYKEADYQ
IAIEDIQVLAADSYHYRRRARLALILDNDHLLVGFRKLESNQIIDIKTCPVLVEPLEKLL
SPLKTCLSSLIDKKSLGHVELIYADSDTIMVLRHVRPLSENDIATLMVFAQQQQISLYLH
GKELIHLFGHTEHYYYINALKLTFSPLNFIQVNSDVNIKMVRQALDWLSPQEDDHILDLF
CGMGNFSLPLAEMCQRVTGVEGVTELVEKAQLNAVLNAPYLLGNVRFFVSNLDDEQAKIE
WYDSSINKVLLDPARAGALQIMDKIIEHSPSHVVYISCNPATLVRDSKKLINSGYEIAQA
AFLDMFPQTKHIESMLLFTKLGRKQDGIN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggttgtattttattctgctcccaaaaaaacggtatctaagccaacaaaaatgaccttg
catatcgatagcattgatgctttcggtcaaggagttgcacgccatcatggtaagactatt
tttgtcaaaaatgccctgccaacagaagatgttgatgttaaagtaaccgaagataaaaaa
cagtatgctaaagcaacggtattaaaatatttacgtaagagtgatcagcgtattatacct
gcttgtatgcattatagtgtctgtggtggctgtgaaatgcagcatataccaagtaaaatg
cagcaccatataaaggctcaggcatttagtgatctattttataaagaggccgactatcag
attgcgattgaagatattcaggttcttgcagcagattcttatcactatcgtcgtcgtgct
cgtttagcactaatacttgataatgatcatttattagttggttttcgtaaactagaatca
aaccaaattattgatattaaaacgtgccccgttttagttgagccattagagaaattactt
tcaccactaaaaacctgtttatcgagtctcattgataaaaaatcattgggacatgttgaa
cttatttatgctgatagtgatactattatggtattgcggcatgtccgccccttgtctgaa
aatgatatagcaacgttaatggtatttgctcagcagcagcaaatctcattgtatctgcat
ggcaaagagttaatacatctttttgggcatactgagcactattattatatcaatgcgtta
aaattgacgtttagtccactcaattttattcaagtaaatagtgatgtaaacatcaagatg
gttcggcaggcacttgattggctatccccacaggaagatgaccatatcttggatctcttt
tgtggcatgggtaatttttctctaccattagcagaaatgtgtcagcgtgtaactggagtg
gaaggcgttacagaattagttgaaaaagcacaactaaatgcggtattgaatgcaccgtat
ttactaggtaatgttcgtttttttgttagtaatcttgatgacgaacaggctaaaattgag
tggtatgatagctcaattaacaaagtattgcttgatccggcaagagctggagccttacaa
ataatggataaaattattgaacattctccttcccatgtggtctatatctcatgcaatcct
gcaacattggttcgagatagcaagaaattgattaactctggttatgaaattgctcaagcg
gctttcttagatatgttcccacaaactaaacatattgagtcaatgttgctgtttacaaaa
ttaggaagaaaacaagatggtatcaattag
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