Oxyplasma meridianum: OXIME_000007
Help
Entry
OXIME_000007 CDS
T10514
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
omr Oxyplasma meridianum
Pathway
omr03022
Basal transcription factors
omr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OXIME_000007
09124 Replication and repair
03420 Nucleotide excision repair
OXIME_000007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omr03021
]
OXIME_000007
03036 Chromosome and associated proteins [BR:
omr03036
]
OXIME_000007
03400 DNA repair and recombination proteins [BR:
omr03400
]
OXIME_000007
Enzymes [BR:
omr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
OXIME_000007
Transcription machinery [BR:
omr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OXIME_000007
Chromosome and associated proteins [BR:
omr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
OXIME_000007
DNA repair and recombination proteins [BR:
omr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OXIME_000007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
ATPase
PhoH
nSTAND3
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WYX99476
UniProt:
A0AAX4NF49
LinkDB
All DBs
Position
complement(8541..10406)
Genome browser
AA seq
621 aa
AA seq
DB search
MVENYGLRDYQKSIIDFVFEELKKKQSVAIESPTGSGKTIMGLLSAIRSNENQGKKILYL
TRTNSQQEQVINELRSIGNRDIKAVVIQGRSNMCPLYRELETEGEFDSESLSRFCSMRKK
KVMEGDKDACHYFNWKVRDPSTSQYLFSQLPTAEEFYIYGTENNLCPYESVKFALKDANL
VIAPYAFFLNYGVANRFLNHWGVSREELIIILDEAHNLPDLARNASSFRISTNLVNSAEK
ESLDYGDIELMERIRSTDLMEMIRNTIMDLIRDRIGERDEVRIKFQDLRENMMIANSMSS
EKYGNLITYLNIFGEYIAGEKEKKGHVPRSSVFSLSNYLMSWETVDEEKFVAVLSKQRNG
QIEAFCMDPSVLLNPLRESRTIHMSGTLSPIDVYLNVTGFQDSSSRVIPYMFPRENLSVM
YYEGTTTKYDEFDEGGASRLYEQIRSLTSAIHRNTIVFFPSYNVLDRIYSMGFPSDVMVE
SRNKTQSDLMEMISKFRKGGRTLFAVSGGRIAEGMNFPGNQLEFVIIAGIPYPRPDAKQD
SIYRYYDRVFGKGWEYAVTYPTVIKIKQEIGRLIRNETDIGMAMILDKRARYFKKYIPEM
KLSQTPLQDCQDFFMEAARRQ
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
ttggttgaaaattatggtctcagggactaccaaaagagcatcatagattttgtttttgaa
gagctgaagaaaaagcagtctgttgccatagaatccccaactggttcagggaaaacaata
atgggccttctttcggccatacgatccaacgagaaccagggaaagaaaattctgtaccta
acaaggacaaattcccagcaggaacaggtcataaatgagttaaggtccataggtaaccgt
gatataaaagcggttgtgatacagggaaggagcaacatgtgccccctttacagggaactt
gaaacagagggggaatttgattctgaatccctctccagattctgttccatgagaaaaaag
aaggtcatggagggggataaggatgcctgccactatttcaactggaaggtaagagatcct
tctacttcacaatatttattttcacagcttcccacagccgaggaattttacatttacgga
acggaaaataacctctgcccttatgaatcggttaagtttgcgcttaaggatgccaatctg
gttatagccccctatgcctttttcctcaattacggcgttgccaacagatttctcaaccac
tggggagtctccagagaagaactgatcatcatacttgatgaggcacataacctcccggat
cttgcgagaaatgcatcttccttcagaatatccacaaatctggtaaactctgcagaaaag
gaaagcctggactatggggatattgaactgatggagaggatacgatcaaccgatctcatg
gaaatgatcagaaataccataatggatctcattcgtgaccggataggcgagagagatgag
gtgcgtataaaattccaggatctcagagaaaatatgatgatcgcaaattccatgtcctca
gaaaagtacggtaacctcattacatatctgaatatattcggggaatatattgccggtgag
aaggagaagaagggacatgtccccagatcttcagtgttctccctttccaattatctcatg
tcctgggaaacggttgacgaggagaaatttgttgcagttctttcaaagcagagaaatgga
cagatagaggctttttgcatggacccttctgttcttctgaatcccctgagggaatctagg
acaatacatatgtccgggactctcagtccaatagatgtctatctgaatgtaaccggtttt
caggattcatccagcagggttataccatacatgtttcccagagagaatctttcagtcatg
tattatgaagggaccacaacaaagtacgatgaatttgatgaaggtggcgcttcaaggctt
tatgaacagataagatccttaacctcagccatacacagaaacacaatagtattctttccc
tcgtataatgttcttgataggatatacagtatgggattcccctcagatgtcatggttgag
tccagaaacaagacacaatcggacctcatggaaatgataagcaaattcagaaagggggga
agaacactttttgcagtttctggaggacgcatagctgaaggtatgaattttcccggaaac
cagcttgagtttgtcataatagctggaattccatatccaaggccagacgcgaagcaggat
tctatatatagatactatgacagagtttttgggaaagggtgggaatatgcagtaacctat
cccacagtgataaagattaagcaggagatcggcagactgattagaaacgagacagacatc
ggcatggctatgatactggacaagagggcaaggtatttcaaaaagtacatacctgaaatg
aaattgtcgcaaactcctctgcaagactgccaggattttttcatggaagcggccaggaga
cagtga
DBGET
integrated database retrieval system
