Oxyplasma meridianum: OXIME_000916
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Entry
OXIME_000916 CDS
T10514
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
omr Oxyplasma meridianum
Brite
KEGG Orthology (KO) [BR:
omr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omr03016
]
OXIME_000916
Enzymes [BR:
omr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
OXIME_000916
Transfer RNA biogenesis [BR:
omr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
OXIME_000916
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
ELP3_N
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
WYY00349
UniProt:
A0AAX4NGU7
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Position
complement(905556..907130)
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AA seq
524 aa
AA seq
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MIGIKGSVMDFYEEIVQKINSGAIGNKKELQNEKIKLARKAGLDYIPGDVEILNSGHHID
SEYHNLLRIKTTRTVSGVAVVAAMTSPERCPHGKCIYCPGGVDNNSPQAYTGHEPAALRG
RNNNYDPYNEVFSRLKQIDLIGHDTSKVDLIIMGGTFTARTLEYQEWFIKGCLDAMNRSI
SADLQEAIKVNETAERRCIGLTVETKPDWFLEKEIDAALSYGTTKVELGVQNISEEILRK
NMRGHGIAEIVKSTQLSRDAGLKIVYHLMPGMPGSTFHQDLESFRTMINDQAYKPDMLKI
YPTLVVKGTTIYRMWKNGDYVPMDTDTAVDLIVEMMKIMPPWIRIQRMQRDIPVKFIEAG
VKRSDIRNMVEERIRDEKIQTGEIRIREIANDSFGKSQFSLIRRDYDASGGKEIFLSYED
SNGKIIGFARLRIPSENAHRKEMASSSVIREIKVFGNVVPIGSHNDQKWQHRGLGTSLIA
EAERISRDEFGMDRILVISGIGVREYFRMRGYFLLGPYMARNLL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgattggcattaaaggatcggtcatggatttttacgaagagattgttcaaaaaatcaat
tccggtgccataggaaacaaaaaagagttgcagaatgaaaagataaagctggccaggaag
gcaggtctggattatatcccaggtgatgttgagatactgaattccgggcatcatatagac
agtgaatatcacaatcttcttaggatcaagacaacaagaactgtctctggagttgcagtg
gtggctgcaatgacatcacctgaacgctgccctcatggaaaatgcatatactgtccaggc
ggagtggacaataactctccccaggcctatacaggccatgaaccagcggctctaagagga
aggaacaacaactatgatccttacaacgaggtatttagcagactcaagcagattgatctc
ataggacacgacacatcaaaggttgatctcattataatgggtggaacttttactgcccgc
actctggagtaccaggaatggtttatcaaagggtgccttgatgcaatgaacaggtccata
tccgccgaccttcaggaggcaataaaggtaaatgaaactgcagagagaaggtgcataggc
cttacagttgaaacaaaaccggactggtttttagagaaagagattgatgcagctctgtct
tacggaacaaccaaggtggaacttggagtacagaacatctccgaagaaatactcaggaag
aacatgaggggccatggtattgccgagatagtcaaatctacgcagctttcaagagacgcc
ggactgaaaatagtataccaccttatgccgggaatgcccggatcaacattccatcaggat
cttgagagttttaggacaatgataaatgatcaggcgtacaagcctgatatgctgaagatc
tatccaacacttgttgttaagggaactacaatatacaggatgtggaaaaatggagactac
gttcccatggacaccgatacagcagtagatctcattgttgaaatgatgaagatcatgcca
ccatggataaggatacagagaatgcagagagatatacctgttaaattcatagaggcagga
gttaaaagaagcgatatcaggaacatggtggaagagaggatcagggatgaaaaaattcag
accggagagataaggataagggagatagcaaacgattctttcggaaaatctcaattctca
ctgataagaagggattatgatgcttccggtggaaaagagatatttctatcatacgaggat
tcaaacggcaagataattggttttgccagactcaggataccgtcagaaaatgcacacaga
aaagagatggcatcctcctctgtaatcagggagataaaagttttcggcaatgttgtgcca
ataggatcacacaatgatcagaaatggcaacacaggggtctgggaacaagccttatagct
gaggcagaaagaatatcccgggatgaattcggcatggacaggatactagtaatcagtgga
ataggtgtaagggagtatttcaggatgagaggctattttctgcttggtccatacatggca
agaaatcttctgtag
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