Oxyplasma meridianum: OXIME_000948
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Entry
OXIME_000948 CDS
T10514
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
omr Oxyplasma meridianum
Brite
KEGG Orthology (KO) [BR:
omr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omr03016
]
OXIME_000948
Enzymes [BR:
omr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
OXIME_000948
Transfer RNA biogenesis [BR:
omr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
OXIME_000948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
DUF1413
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
WYY00378
UniProt:
A0AAX4NGT4
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All DBs
Position
927780..928703
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AA seq
307 aa
AA seq
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MGGAICSGILFNITGNKSPSFLQNHYKLGKMVDGSLVLNNFECVFLYYKKRIDPVNPFYR
KSTNLLRDLLKDDGEGELYIVYETLKIRGYYVKRENDMLFARKSPRGDYMGPIIVRRENS
TTDFSYLYSNTPAYYFTLDEDGDITAFLVTAEEMNGMNEEKIPDDIKIEKVGGRFVTDNK
DIPDWYGQRFKDLRILSDFETGYHKSDDKDRSLNRIYGELIDRRFIVKSGFKYGAHFRAY
VKNIQEHAEFLIHYLDGPEEWYKISRAVRVANGVRKRMIFCGFIENRLLFVEIKRIRDPL
KDQQTDG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggctatctgttccggcattctatttaatataaccggaaacaaaagcccatct
tttctccagaatcattacaaactgggaaagatggtggacggttctctggtgcttaacaat
tttgagtgcgtcttcctttattacaaaaaaagaattgatcctgttaatcccttttaccga
aaatctaccaaccttttacgggacctccttaaggatgatggagagggtgaactttacata
gtatatgaaacactgaaaattcgaggatactatgtaaaaagagaaaacgacatgctgttt
gccagaaaatcgcctcgtggcgattatatgggtcctattattgtaaggagagaaaatagc
acaactgatttttcctacctttactccaatactccagcttactattttacacttgatgaa
gacggagacatcacggcttttcttgttacagcggaggaaatgaatggtatgaacgaggag
aagatacctgatgacataaaaattgaaaaagtcggaggtagatttgtaactgacaataaa
gatattccagactggtatgggcagcggttcaaggacctgagaattttaagcgactttgag
actggttaccataaatctgatgacaaagataggtcgttgaacagaatttacggcgagctc
attgacagaagattcatagtcaagagtggattcaagtatggtgctcacttccgtgcatat
gtgaaaaatatacaggaacatgctgaattccttattcactaccttgatggaccagaggag
tggtataagataagcagggctgttagagtggccaatggagtgagaaagaggatgatattt
tgcggttttattgagaataggctcttatttgttgaaatcaaaagaataagagatccctta
aaggatcaacaaaccgatggataa
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