Oxyplasma meridianum: OXIME_001251
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Entry
OXIME_001251 CDS
T10514
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
omr Oxyplasma meridianum
Brite
KEGG Orthology (KO) [BR:
omr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omr03016
]
OXIME_001251
Enzymes [BR:
omr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OXIME_001251
Transfer RNA biogenesis [BR:
omr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OXIME_001251
Prokaryotic type
OXIME_001251
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Pus10_C
DKCLD
PseudoU_synth_2
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
WYY00670
UniProt:
A0AAX4NIV8
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Position
complement(1198477..1199670)
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AA seq
397 aa
AA seq
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MNRSKEKTSADFLEGFIVIDKPKGPTSHQIDYWVRSILGIEKVAHIGTLDPSATGVLVMA
LGRAVKLVEIAHEMPKEYVGVMFIHEDVGEEKVRKVMEEFTGEIYQIPPVRSAVSRNLRT
RWIYSLEIIEKKGRDILFRVRSESGTYVRTLCTDMGYVLGTGGQLMDLRRTASGIFSEKD
AVTLQDLSDAMKLAEEGENSALRKIVFPMDYLFRDYGKIVVKASAIQNIAHGSDLFPGGI
KAIIGTPLRGDRVVAISDTNEILASGKMLVSYSQITDTKVVDFDRVMLDPNPKKVNFISG
SVEKPARLTGKVTKPEQRKNRVDRSDDSKFREDNKKVVRRDKERKRDMGLQRPQNKFHRD
FRRPEKGRDSRKGNDKGEKRAFPARSPYGVRKKKNKR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatcaaaggaaaagacctctgctgactttctggaaggctttatagtaatagat
aaacccaagggacccacaagccaccagattgattactgggtcaggtcaattctgggaata
gagaaggttgcccatattggtacactggacccttctgccacgggagttcttgtaatggcg
ctgggcagagcggtgaaacttgtggagatcgcacatgaaatgccaaaggaatacgtaggt
gttatgtttattcacgaggatgtaggcgaggaaaaagtaagaaaggttatggaggaattc
acaggtgagatataccagatacctccagtaagatcagcagtttcaagaaatcttcgtaca
agatggatatacagcctggaaatcattgagaaaaaggggagagatatacttttcagagtt
agatcggagtctggaacatatgttaggactctctgtacagatatgggatacgtactgggc
accgggggacagttaatggatctacgcaggactgcaagcggaatttttagtgagaaagat
gctgtaacacttcaggatctcagtgatgcaatgaagcttgcggaagagggagaaaacagt
gcactgaggaaaatagtatttccaatggattatctcttcagggattatgggaagatagtg
gtcaaagcatcagcaatccagaacatagctcatggttcggatcttttcccaggcggtata
aaagcaattatcggaactccactgaggggagacagggttgttgcaatttctgatacaaat
gagatacttgccagtggaaaaatgcttgtatcatactcacagatcacagatacaaaggtt
gttgactttgacagggttatgcttgatccaaatccgaaaaaagtaaatttcatttcaggt
tctgtggaaaaacctgccaggttgacagggaaagtaaccaaaccggaacagagaaagaac
agggttgatagatcagatgacagtaaattcagggaagacaacaagaaagtggtacggaga
gataaggaacggaaaagagatatgggtctacagagacctcagaacaaatttcatagagat
tttcgacgccctgagaaggggagagattccagaaagggaaatgataagggagaaaagcga
gccttccctgcacgatctccttatggagtacggaaaaaaaagaataaaagatga
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